DRSC/TRiP Functional Genomics Resources

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Protein Alignment IFT46 and ift46

DIOPT Version :9

Sequence 1:NP_609890.2 Gene:IFT46 / 35114 FlyBaseID:FBgn0032692 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_004916113.2 Gene:ift46 / 100380190 XenbaseID:XB-GENE-986153 Length:418 Species:Xenopus tropicalis


Alignment Length:435 Identity:116/435 - (26%)
Similarity:171/435 - (39%) Gaps:142/435 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDEEITIGGPDSKHLSSVQM-EPRNGGT-----GGGRGGA------------GGGGPGAVGGEGA 50
            |||.:.:.  ||:.::||.. .||..||     |..||.|            ..|.....|..|.
 Frog    62 YDESLEVN--DSEEVASVYTPTPRRPGTAKQMSGKVRGMAELAISSEDEESTKSGKKKKAGKLGD 124

  Fly    51 VRRAAAGRHRRMFQNNSTDD-DGLLQDIIDHDDEAEDSEDDDDSEMQLPQGMTMGVGMTGLVPGP 114
            ||.|   |.:.:..:..|:| :|..:|..|.||..:|.|||||                      
 Frog   125 VRGA---RTQGLTDDEDTEDTEGDDEDDDDDDDNDDDDEDDDD---------------------- 164

  Fly   115 NMQKRPGSNRSSKQVPDDTLSSGSEEAAMGGRMGSGGARGGAKLPHQKLTLPMRGSASGAGRSKR 179
                            ||     .||.......|...|                           
 Frog   165 ----------------DD-----DEEGHANSNEGYNPA--------------------------- 181

  Fly   180 QDDQSFIMSADKWEDLSVPGELKELFPYIVKYTPQTIDTPFHLQPFIPEFVPAVGDVDALLKVQA 244
                       .:|.|.|..|:||||.||.:||||.::..:.|:||||:|:|||||:||.|||..
 Frog   182 -----------DYEHLPVTAEIKELFQYITRYTPQVVELDYKLKPFIPDFIPAVGDIDAFLKVPR 235

  Fly   245 PPLLQPQRQKDLNDHLEKLGLWLLDEPSGAQSEPSLL------NMKLRSVLSGSMGRNPRHASSA 303
            |           :...:.|||..|||||..||:|:::      |.|..||        .:|....
 Frog   236 P-----------DGKPDNLGLLTLDEPSTRQSDPTVMALWLSENSKQHSV--------TQHIKVK 281

  Fly   304 SLVPTARSGKDIEKWITEVEQVHMTQ---SMYDVQPRKDIDALLEDWPRSFGDEQTINALDQAYR 365
            ||....|:.|.|:.||..:.::|.::   :::..:|..|||.|:::||..|.:.....:|..|..
 Frog   282 SLENAERNSKAIDAWIESISELHRSKPPATVHYTRPMPDIDTLMQEWPSEFEELLGKVSLPTADI 346

  Fly   366 SCLQQNISVAEYVGVLCERFGVEGPLESQADYIHNVQTLFALYLA 410
            .|     .::.|:.::|....:  |:....  |.::..||:||.|
 Frog   347 DC-----DLSSYIDMICGILDI--PVHKSR--IQSLHVLFSLYSA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IFT46NP_609890.2 IFT46_B_C 189..409 CDD:289115 73/228 (32%)
ift46XP_004916113.2 IFT46_B_C 179..381 CDD:403511 74/267 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 119 1.000 Domainoid score I5758
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 149 1.000 Inparanoid score I4288
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006643
OrthoInspector 1 1.000 - - oto105145
Panther 1 1.100 - - LDO PTHR13376
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4873
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

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