DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31741 and scarb2

DIOPT Version :10

Sequence 1:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001016557.1 Gene:scarb2 / 549311 XenbaseID:XB-GENE-948022 Length:483 Species:Xenopus tropicalis


Alignment Length:477 Identity:110/477 - (23%)
Similarity:207/477 - (43%) Gaps:36/477 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LILAIGIFLASAWPAVSRQWIRSLLPLAPNSFIYNRWVTTPTPVYSTVFLFNWTNPGDLNTEGVK 85
            ||::|.:.|...:..:....::..:.|...|.::..|...|.|||...:.||.|||.:: ..|.|
 Frog    17 LIVSIVLLLTHTFMDIVEGQVKQAIVLKNESEVFEDWANPPPPVYMQFYFFNVTNPLEV-LSGEK 80

  Fly    86 PHFEQLGPYTFSDFKVKEDLEW--NQPQVTYFGKRTWHFLPEKSNGSLD-DVVIAPHFPTLTAAL 147
            |..:::||||:.:::.:|::.:  |..:|:....:|:.|.||||.|... |::...:.|.:| .|
 Frog    81 PFVDEIGPYTYREYRPRENITFSVNGTEVSAVTPKTYVFEPEKSIGDPKVDLIRTVNIPLVT-IL 144

  Fly   148 YSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLLDFVEQLHSPLLPVYDNTFGWFY 212
            ...:...:||..:...|........:|.|..:.|: ||.|.:|..   || |......:|||.||
 Frog   145 EMTKDSSLLRPFIIAALKTYKEGMFVTRTVDELLW-GYKDAVLSI---LH-PFKKNISDTFGLFY 204

  Fly   213 ERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNGENTTGFYPGE-CGKVNGSTGELWSPYRTWDQPT 276
            :.|.  |.:|.:...:|..|..:...:..|.|:....::..| |..:||:.|..:.|....|...
 Frog   205 KMNT--TDDGEYIFLSGEKDYLEFTQIAEWKGQKALNWWTTETCNMINGTDGTSFHPLLNKDDTI 267

  Fly   277 TIFLPDAARYLNLFPKENLTIDGIDVWRYESTNLTIDNGQLSPDTECFCLKNRECPRNGVLDYGP 341
            .:|..|..|.:....:.:..|..|.|:|:........|..::|..:.||:....|..:|:|:...
 Frog   268 YMFSSDLCRSIYAVYESSENIKDISVFRFSPPASVFANVSVNPQNKGFCVPEGNCLPSGLLNVSI 332

  Fly   342 PAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIMEPTLGIPLSLRGQLMISTKVVRDE 406
            .....|..:|.|||:..|:....:..|::|.:..|..::.:.|..|..:....::.::. .||..
 Frog   333 CKEGAPIVLSSPHFYQADENVINSIRGMKPVKEHHMTFLDLNPLTGTLIQAAKRIQVNV-YVRKI 396

  Fly   407 AIDLFKNVAYDHYAPLFTMRLHAEL---DEGLTKLLKLALNAAIIGMYTGIGLVLLGMSIVVTGI 468
            .:.|........:.|:  |.|:..:   |:...:|..:.....::   ..|..:::|:.|::..:
 Frog   397 NVYLITQDIQTLFFPV--MHLNESVLIDDKSAGRLRSILFQGRVV---ANIPFIIMGLGIILAFL 456

  Fly   469 FITKKHKWHSEQRPDKHLQCTQ 490
            |.|              |.|.|
 Frog   457 FTT--------------LSCLQ 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31741NP_724088.2 CD36 19..471 CDD:460076 106/456 (23%)
scarb2NP_001016557.1 CD36 29..460 CDD:460076 103/459 (22%)

Return to query results.
Submit another query.