DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31741 and Scarb2

DIOPT Version :10

Sequence 1:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_446453.1 Gene:Scarb2 / 117106 RGDID:621882 Length:478 Species:Rattus norvegicus


Alignment Length:480 Identity:115/480 - (23%)
Similarity:212/480 - (44%) Gaps:45/480 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CCSVRQQKIWVFSMGG------LILAIGIFLASAWPAVSRQWIRSLLPLAPNSFIYNRWVTTPTP 63
            ||         |...|      |:.::.:.:|..:.....|.|...:.|...:.:::.|...|.|
  Rat     4 CC---------FYTAGTLSLLLLVTSVTLLVARVFQKAVDQTIEKNMVLQNGTKVFDSWEKPPLP 59

  Fly    64 VYSTVFLFNWTNPGDLNTEGVKPHFEQLGPYTFSDFKVKEDLEWNQPQVTYFGKRTWHFLPEKSN 128
            ||...:.||.|||.:: .:|..|..|::||||:.:.:.|.::::.:...|........::.|::.
  Rat    60 VYIQFYFFNVTNPEEI-LQGEIPLLEEVGPYTYRELRNKANVQFGENGTTISAVTNKAYIFERNQ 123

  Fly   129 GSLD---DVVIAPHFPTLTAALYSRRLRRILRKVMNFTLNREGGATHMTHTAGQWLFDGYYDHLL 190
            ...|   |::...:.|.||....::  :..||:::...|........:|||..:.|: ||.|.:|
  Rat   124 SVGDPTVDLIRTINIPLLTVVEMAQ--QPFLREIIEAMLKAYQQTLFVTHTVHELLW-GYKDEVL 185

  Fly   191 DFVEQLHSPLLPVYDNTFGWFYERNNSKTAEGNFTLHTGRGDLSQLGDLLLWNGENTTGFYPGE- 254
            ..|......:.|    .||.|||||.  |.:|.:...||..:......::.|||:.:..::..: 
  Rat   186 SLVHIFRPDVSP----NFGLFYERNG--TNDGEYVFLTGEDNYLNFTKIVEWNGKTSLDWWTTDT 244

  Fly   255 CGKVNGSTGELWSPYRTWDQPTTIFLPDAAR--YLNLFPKENLTIDGIDVWRYESTNLTIDNGQL 317
            |..:||:.|:.:.|..:.|:...||..|..|  |:.....||  ::|:..:||:.....:.|   
  Rat   245 CNMINGTDGDSFHPLISKDETLYIFPSDFCRSVYITFSSFEN--VEGLPAFRYKVPAEILAN--- 304

  Fly   318 SPDTECFCLKNRECPRNGVLDYGPPAFNGPFYMSHPHFFLTDQMYRENTTGLQPEESEHGMYVIM 382
            |.:...||:....|...|||:........|..||.|||:..|:.:.....|::|.:.||..:|.:
  Rat   305 SSENAGFCIPEGNCMDAGVLNVSICKNGAPIIMSFPHFYQADEKFVSAIKGMRPNKEEHESFVDI 369

  Fly   383 EPTLGIPLSLRGQLMISTKVVR-DEAIDL--FKNVAYDHYAPLFTMRLHAELDEGLTKLLKLALN 444
            .|..||.|....:..|:|.|.: |:.::.  .:.:.:    |:..:.....:|:.....||..:|
  Rat   370 NPLTGIILRGAKRFQINTYVKKLDDFVETGNIRTMVF----PVMYLNESVLIDKETASQLKSVIN 430

  Fly   445 AAIIGMYTGIGLVLLGMSIVVTGIF 469
            ..:|  .|.|..:::.:.:....||
  Rat   431 TTLI--VTNIPYIIMALGVFFGLIF 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31741NP_724088.2 CD36 19..471 CDD:460076 112/466 (24%)
Scarb2NP_446453.1 CD36 28..457 CDD:460076 109/447 (24%)
Important for interaction with GBA1. /evidence=ECO:0000250 155..191 10/36 (28%)

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