DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPH93 and CG1299

DIOPT Version :9

Sequence 1:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_647862.1 Gene:CG1299 / 38496 FlyBaseID:FBgn0035501 Length:511 Species:Drosophila melanogaster


Alignment Length:519 Identity:122/519 - (23%)
Similarity:199/519 - (38%) Gaps:113/519 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 TCVTRNFC-----LYEEPTFD--------------YRSSNCGNTKICCAVLRK------------ 57
            :||...:|     :::..:.|              .||.| |:..|||...|.            
  Fly    46 SCVALTYCPQVVNIFQTTSRDRAQRYVIALQRSCGTRSIN-GDPVICCTEPRYNPVTERPRNPFF 109

  Fly    58 PGGTVLIEPNGPED--DKVGVNGINAQLSPTRELTRDRPNTIESQVKEINDFSGRPTNNERNPAT 120
            |..:..|.|..|.:  |       |..|.||...|.....|..:.:.:          ....|..
  Fly   110 PSESTFIGPQPPPEVPD-------NPFLIPTPRTTTTTTTTTPAPIPD----------TSAAPLI 157

  Fly   121 EPN----NGGYTTPNGGYPVNNGGYPVNNGGYPSNNGGYPSNNGGYPVNNGGYPVNNGGYPANNG 181
            ||.    .|..|.|.....:......:|.....|.:..:                  ..:...:.
  Fly   158 EPRGTVCRGPDTKPGNCVEIKECASLLNELRSRSQDATF------------------ANFLRASN 204

  Fly   182 GYPANNGGYPTTNVGNPTNNGGNPTTNFGN---PTNNGGNPTTNVGSSELLSPSCGMSNANGLQM 243
            ....|.|    |.|..||..|...||...:   |.|....|...:...|    .||.:.....::
  Fly   205 AVCQNKG----TQVCCPTGQGITNTTPAPSQIVPKNTDEIPRRLLNVEE----GCGSTVGYFKKI 261

  Fly   244 VEGITIDQARPAQYPWAVAIFHN----GQYLAGGSLIQPNVVLTVAHRVITIETEL-VVRAGDWD 303
            |.|   :.:|...:||...:.::    ..:..||:||....|||.||   .|..:| .||.|:.|
  Fly   262 VGG---EVSRKGAWPWIALLGYDDPSGSPFKCGGTLITARHVLTAAH---CIRQDLQFVRLGEHD 320

  Fly   304 LKSDRE---IFLSEQREVERAVIHEGFDFKSGANNLALLFLNSPFKLNDHIRTICLP-TPN---K 361
            |.:|.|   :.::    :.|.|.|..::.::|.:::|:|:|....:....|..|||| |.|   |
  Fly   321 LSTDTETGHVDIN----IARYVSHPDYNRRNGRSDMAILYLERNVEFTSKIAPICLPHTANLRQK 381

  Fly   362 SFAGRRCTVAGWGKMRYEDQRYSTVLKKVQLLVVNRNVC-EKFLRSTRLGAKFELPKNIICAG-- 423
            |:.|....|||||| ..|....:.||.::|:.:.:..|| :.:.:..|..:..:..|.::|||  
  Fly   382 SYVGYMPFVAGWGK-TMEGGESAQVLNELQIPIYDNKVCVQSYAKEKRYFSADQFDKAVLCAGVL 445

  Fly   424 -GELGRDTCTGDGGSALFCSIGGENSGVYEQAGIVNWGVGCGQEGIPAIYTEVSKFTNWITEKL 486
             |  |:|||.||.|..|......:....:...|:|::|:||.:..:|.:|:....|.:||.:::
  Fly   446 SG--GKDTCQGDSGGPLMLPEPYQGQLRFYLIGVVSYGIGCARPNVPGVYSSTQYFMDWIIQQV 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPH93NP_609840.1 GRP <136..189 CDD:254089 3/52 (6%)
Tryp_SPc 250..485 CDD:238113 74/250 (30%)
Tryp_SPc 252..482 CDD:214473 72/245 (29%)
CG1299NP_647862.1 CLIP 37..93 CDD:197829 10/47 (21%)
CLIP 164..216 CDD:288855 9/73 (12%)
Tryp_SPc 260..503 CDD:214473 74/255 (29%)
Tryp_SPc 261..503 CDD:238113 74/254 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.