DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG12620 and LOC497940

Sequence 1:NP_001260525.1 Gene:CG12620 FlyBaseID:FBgn0032626 Length:287 Species:Drosophila melanogaster
Sequence 2:XP_006246839.1 Gene:LOC497940 RGDID:1563007 Length:460 Species:Rattus norvegicus

Alignment Length:102 Identity:22/103 (21%)
Similarity:38/103 (37%) Gaps:19/103 (18%)


  Fly   178 FHPAHHCYNKLISQTPDPPIVYVPAEPEPQPEPQPEPPVEPRPEPEPEPEPETVLPPTAPEVIDK 242
            :|||...|.            ::.|:       :|..|.....:.:.:|..|:.|..|...|.::
  Rat   163 YHPADKDYG------------FMKAD-------EPRTPYHRLQDNDEDPSAESSLKVTPESVAER 208

  Fly   243 TAPEEEKHTRVLDRGENIDLKNLSAIQKNISSSVKKH 279
            .|..:....:||..|:|.:.|......|..|:...||
  Rat   209 FATMDNFLPKVLQYGDNKNSKTTDNFTKTHSTDFDKH 245

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG12620NP_001260525.1 IPP-2 <21..111 CDD:282789
LOC497940XP_006246839.1 IPP-2 152..257 CDD:282789 22/103 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C74741
eggNOG 1 0.900 E1_KOG4041
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1321970at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR12398
Phylome 00.000 Not matched by this tool.
TreeFam 1 0.960
54.900

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