DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12620 and szy-2

DIOPT Version :10

Sequence 1:NP_609828.2 Gene:CG12620 / 35034 FlyBaseID:FBgn0032626 Length:287 Species:Drosophila melanogaster
Sequence 2:NP_498147.1 Gene:szy-2 / 175738 WormBaseID:WBGene00021312 Length:193 Species:Caenorhabditis elegans


Alignment Length:131 Identity:34/131 - (25%)
Similarity:46/131 - (35%) Gaps:52/131 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RTRFDKMNLGVPVH--------------SDPY-EVENESASSIKRETGEKVMSHKELMEKLHKEV 54
            |..||:||:....|              ..|| ..:.||      |..|.|:.           |
 Worm    51 RAHFDEMNILATYHPTDKDYGSMKIDEPKTPYHHSDGES------ECDEGVLG-----------V 98

  Fly    55 KLTTP---------------DFFAHDPS----CSSDDSEDFEFLETIKERARRISFVRRRKLHYT 100
            ..|.|               :..||..|    .|::||||...| |.::||.|..|.::|:.||.
 Worm    99 PTTRPRRVSLGNAIDPEKVAEGLAHPESGKSLSSAEDSEDEADL-TEEQRAHRRDFEKKRRAHYN 162

  Fly   101 E 101
            |
 Worm   163 E 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12620NP_609828.2 IPP-2 <18..115 CDD:461504 29/118 (25%)
szy-2NP_498147.1 IPP-2 52..176 CDD:461504 33/130 (25%)

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