DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cse1 and Ipo9

DIOPT Version :10

Sequence 1:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_650068.1 Gene:Ipo9 / 41367 FlyBaseID:FBgn0037894 Length:1018 Species:Drosophila melanogaster


Alignment Length:143 Identity:35/143 - (24%)
Similarity:57/143 - (39%) Gaps:37/143 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LKNKKTSFG-------STLLDCVQSGF----ENPDSG--VGIYAP-DAEAYSLFADLFDPIIEDY 94
            |:|::.|:|       |..::.:|...    |:| ||  |.:..| |....|:..|:|       
  Fly    87 LRNRRVSYGKIPVPPMSMTVEDIQEAAKHSREDP-SGETVEVRRPNDPRRSSVSLDVF------- 143

  Fly    95 HKGFKKTDKH-----PASDFGDVNAFGNVDPTGEFVVSTRVRCGRSMEGYPFNPCLTEAQYKEME 154
             |.|:  |.|     ||.| ..:...|   |.|:|   ..::.|:......|:....:|:.|:.|
  Fly   144 -KSFR--DPHDKRNMPAKD-KTIYVEG---PNGKF---REMKKGKFWNRDKFDSPKKDAEKKQDE 198

  Fly   155 GKVSTTLSGLEGE 167
            ..|...|....|:
  Fly   199 DSVIPFLLKAPGQ 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cse1NP_523588.2 IBN_N 29..105 CDD:397745 20/79 (25%)
Cse1 159..529 CDD:430038 2/9 (22%)
CAS_CSE1 530..966 CDD:367469
Ipo9NP_650068.1 SXM1 14..891 CDD:227943 35/143 (24%)
CSE1 17..>424 CDD:227944 35/143 (24%)
Blue background indicates that the domain is not in the aligned region.

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