DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cse1 and cse1l

DIOPT Version :10

Sequence 1:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_012827002.1 Gene:cse1l / 100158534 XenbaseID:XB-GENE-5802331 Length:1007 Species:Xenopus tropicalis


Alignment Length:980 Identity:507/980 - (51%)
Similarity:683/980 - (69%) Gaps:23/980 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVTEANLQLLAGYLQQTLSADPNVRRPAEKLLESTELQQNYPILLLNLIDKAQMDMTTRVAGAI 65
            ||::|||||.|..||::||..||.|||||||.|||.|..||||:|||.|::::| |...:|..|:
 Frog    37 MELSEANLQGLTEYLKKTLDPDPAVRRPAEKYLESVEGNQNYPLLLLTLVERSQ-DNVIKVCSAV 100

  Fly    66 AFKNYIKRNWAAHLDSDGPDRIHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPKKW 130
            .|||||||||  .:..|.|:.|.|:||..||:.|:.|||.||..:|||.|||:||||:.|||:||
 Frog   101 TFKNYIKRNW--RIIEDEPNNICEADRIAIKSSIINLMLSSPEQIQKQFSDAISIIGREDFPQKW 163

  Fly   131 PQLIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFVLDRMAKPLTDLLQATM 195
            |.|:.|||.||.||||:||||||.||||||||||:||||..||.|||.|||..|.|||||.:||:
 Frog   164 PNLLTEMVNRFQSGDFHVINGVLHTAHSLFKRYRHEFKSSELWTEIKLVLDTFAAPLTDLFKATI 228

  Fly   196 QLTKVHENNAGALKVIYGSLVLVNKVFFSLNSQDLPEFFEDNINTWMGAFIQQLAADVPSLRTAD 260
            :|...|.|:..||||::.||:|:.|:|.|||.||||||||||:.|||..|...|..|...|:|.|
 Frog   229 ELCNTHANDVNALKVLFSSLILIAKLFHSLNFQDLPEFFEDNMETWMTNFHNLLTLDNKLLQTDD 293

  Fly   261 DEDAGVLEHLRAQVCENICLYAKKYDEEFKPFMEQFVTAVWELLVKTSLHTKYDSLVSHALQFLS 325
            :|:||:||.|::|:|:|..|||:||||||:|::.:||||:|.|||.|....|||.|||:|:|||:
 Frog   294 EEEAGLLETLKSQICDNAALYAQKYDEEFQPYLPRFVTAIWNLLVTTGQEVKYDLLVSNAIQFLA 358

  Fly   326 VVADRQHYQSIFENPEILAQICDKVVIPNLDIRPSDEEIFEDSPEEYIRRDIEGSDIDTRRRAAC 390
            .|.:|.||:::||:|..|..||:||::||::.|.:|||.|||:.|||||||:|||||||||||||
 Frog   359 SVCERPHYKNLFEDPSTLTSICEKVIVPNMEFRAADEEAFEDNSEEYIRRDLEGSDIDTRRRAAC 423

  Fly   391 DLVKTLSINFEQKIFGIFGQYLERLLTKYKENPATNWRSKDTAIYLVTSWASRGGTQKHGITQTS 455
            |||:.|...||..:..||..|:..:|.:|.::|:.||:.||.|||||||.||:..||||||||.:
 Frog   424 DLVRGLCKFFEGPVTNIFSGYVSSMLQEYAKSPSVNWKHKDAAIYLVTSLASKAQTQKHGITQAN 488

  Fly   456 ELVPLPEFCAQQIIPELERPNINEFPVLKAAAIKYVMVFRSILGPQVLASCLPQLIRHLPAESSV 520
            |||.:.||....|:|:|:..||||:|||||..|||:|.|||.|..:.|...:|.||.||.|||.|
 Frog   489 ELVNITEFFVNHILPDLKSANINEYPVLKADGIKYIMFFRSQLPKEQLLVTIPLLIAHLQAESVV 553

  Fly   521 VHSYAACSVEKILSMRDASNAIVFGPQILAPYTTELISGLFATLSLPGSGENEYVMKAIMRSFSV 585
            ||:|||.::|:..:|:.|::..:.....:.||...|::.||..||||||.||||:|||||||||:
 Frog   554 VHTYAAHALERFFTMKGATSPTLIVAAEMMPYVELLLANLFKALSLPGSSENEYIMKAIMRSFSL 618

  Fly   586 LQSAAMPFMGVALPRLTEILTQVAKNPSRPQFNHYLFETLALCIKIVCHADSSAVSSFEEALFPV 650
            ||.|.:|::...:.:||:.|..|:||||:|.|||||||.:.|.|:|.|.|:.:||.|||:|||.|
 Frog   619 LQEAIIPYIPSVISQLTQKLLAVSKNPSKPHFNHYLFEAICLSIRITCRANPAAVGSFEDALFLV 683

  Fly   651 FQGILQQDIVEFMPYVFQMLSVLLEMREGTGTIPEPYWALFPCLLSPALWDRTGNVTPLIRLISA 715
            |..|||.|:.||:|||||::|:|||:.  ...||..|.||||.||.|.||:||||:.||:||:.|
 Frog   684 FTEILQSDVQEFIPYVFQVMSLLLEIH--ANDIPTSYMALFPHLLQPVLWERTGNIPPLVRLLQA 746

  Fly   716 FIKQGSAQI--QALGKLSGILGIFQKMIASKANDHEGFYLLQNLLSYYPPAEIQTNLRQIFGLLF 778
            ::::|:..|  .|..|:.|:||:|||:||||||||:|||||.:::.:.|...|:...||||.:||
 Frog   747 YLERGANTIAASASDKIPGLLGVFQKLIASKANDHQGFYLLNSIIEHLPAECIEQYKRQIFIVLF 811

  Fly   779 QRLSLSKTPKYLSGIIIFFSFYVIKFSGSQMAQLIDEIQPNLFGMLLDRVFITEMGKIPKEQDRK 843
            |||..|||.|::...::|.:.:.|||....:.::.|.|||.:|||:::::.|.|:.|:....::|
 Frog   812 QRLQSSKTTKFVKSFLVFLNLFCIKFGAIALQEMFDSIQPKMFGMVVEKIIIPEIQKVSGPIEKK 876

  Fly   844 MVAVGVTKLLTETPEILQQQYATFWPRLLHSLIDLFERP-----PEKLMGLEIGETAGVAEDPDA 903
            :.|||:||:|||.|.::..:|...|..||.:||.|||.|     |:....::|.:|        .
 Frog   877 ICAVGLTKVLTECPAMMDTEYTKLWTPLLQALIGLFELPEDDTIPDDEHFIDIEDT--------P 933

  Fly   904 GYQVAFAQLTHAQPNQQDHLAE-IKDARQFLATSLSKFAQARAGEFSTLLS-PLEPEYKQVLQKY 966
            |||.||:||..|...:.|.:.| :.:.:..||.||.|.:.|..|...:::| .|..:..|.||.|
 Frog   934 GYQAAFSQLAFAGKKEHDPIGEMVNNPKILLAQSLHKLSTACPGRVPSMISTSLNADALQFLQGY 998

  Fly   967 CDQAG 971
            . |||
 Frog   999 L-QAG 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cse1NP_523588.2 IBN_N 29..105 CDD:397745 39/75 (52%)
Cse1 159..529 CDD:430038 212/369 (57%)
CAS_CSE1 530..966 CDD:367469 195/444 (44%)
cse1lXP_012827002.1 IBN_N 65..138 CDD:197981 39/75 (52%)
Cse1 192..562 CDD:430038 212/369 (57%)
CAS_CSE1 563..998 CDD:367469 195/444 (44%)

Return to query results.
Submit another query.