DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13280 and dhdh.1

DIOPT Version :10

Sequence 1:NP_609812.1 Gene:CG13280 / 35015 FlyBaseID:FBgn0032609 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_999900.1 Gene:dhdh.1 / 406433 ZFINID:ZDB-GENE-040426-2180 Length:334 Species:Danio rerio


Alignment Length:328 Identity:121/328 - (36%)
Similarity:166/328 - (50%) Gaps:12/328 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 RWGIAPVSLMADDFAAALSVLPEQHHRIVSCVAAYQSHALAFAERHQVENVYTSFEDLAKCPNVD 157
            ||||.....::.||..||..|.||.|:||:..|.....|..||:.|.:...|.|:::|.|.||:|
Zfish     4 RWGICGSGNISHDFCVALRTLAEQEHQIVAVAARSLERAQKFAKTHGIPKAYGSYQELVKDPNID 68

  Fly   158 VVYISPLNPQHSELCHLMLNHDKHVLCEKPLCMTEEQVTKLLEKARARGLFLMEGMWPRCVPAYH 222
            ||||..::..|..:..|.||..|.||||||..|...::.:|:...|...:||||.||.||.|.|.
Zfish    69 VVYIGVVHTHHLPVGLLFLNAGKSVLCEKPFTMNSRELRQLISATRENNVFLMEAMWSRCFPVYS 133

  Fly   223 YLRHQILRNRLGEIKQVHCTLGLPV------SQGRLGLYGGVTNDFGVYGMQLALWVFR-EVPRC 280
            .:...:....:||:|.|....||.:      :|...|  ||.....|||.:|.||.||. |.|..
Zfish   134 EISRLLSEQAVGEVKMVSVYFGLNLLDRIHTTQKEQG--GGSLLYIGVYCVQFALMVFNGEKPES 196

  Fly   281 LKVSGRVNSEHVDVSADIELCFTRGKRALIEVSSEKKLSNQAVIQGKDGSIKMNN-YWCPTRLIT 344
            :..:|.:....||.|..:.|.|:..:.|:...|....|.|.|.|.|..|:|.::: ..|||.|..
Zfish   197 ISATGVLLPSGVDESMVVVLKFSGNRIAVCSSSLACALPNTASIFGTTGTITVSSPMHCPTTLEV 261

  Fly   345 EEVDYEFPLPGGDQLPPTHYHNRLGMCYEAEEVRNCILKGSTESDDFSHNESLLLANLMDTIHAE 409
            .....|||||  |...|.::.|..|:.|||||||.|:.||..||...|..:|.|:..:||....:
Zfish   262 NGQKSEFPLP--DPRLPLNFPNSTGLRYEAEEVRRCLQKGLKESIRMSLADSELVMEIMDEARRQ 324

  Fly   410 LGV 412
            :||
Zfish   325 VGV 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13280NP_609812.1 MviM 91..331 CDD:440437 88/244 (36%)
dhdh.1NP_999900.1 MviM 4..247 CDD:440437 88/244 (36%)

Return to query results.
Submit another query.