DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChLD3 and Cda9

DIOPT Version :10

Sequence 1:NP_609806.1 Gene:ChLD3 / 35002 FlyBaseID:FBgn0032598 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_611192.1 Gene:Cda9 / 36934 FlyBaseID:FBgn0034197 Length:397 Species:Drosophila melanogaster


Alignment Length:385 Identity:140/385 - (36%)
Similarity:196/385 - (50%) Gaps:49/385 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 AGACDPRKCHLPQCFCSKDGTQIPGSLPA-------QSVPQMILLTFDDAINHDNWE----LFSK 264
            |..|.|.||.||.|.||      ..:||.       ..:||.:.:|||||:|..|:.    ||..
  Fly    39 AEPCKPSKCKLPDCRCS------DAALPTSKFQGKENQIPQFVTITFDDAVNAVNFAQYELLFDG 97

  Fly   265 VLFTQHRRNPNGCPIKGTFYVSHPFTNYQYVQKLWNDGHEIAVHSVTH-RGPEMWWSKNA-TIED 327
            ::      ||:||...|||::||.:|:|..|..|:..|||||:||||| .|.:.|.|.:. ||| 
  Fly    98 LI------NPDGCGAAGTFFLSHEYTDYVRVNALYRAGHEIALHSVTHGDGTDYWRSADVPTIE- 155

  Fly   328 WFDEMVGQANIINKFAAVRMEEIRGMRVPFLRVGWNRQFLMMKEFGFVYDSSM-VAPHSNPPLWP 391
              .|...|..::..||.|..::|:|||:|||::..|..|...:..|..||||. .....:|.:||
  Fly   156 --REFGAQLKMLETFAKVNPKKIQGMRLPFLQISGNNTFEAARRLGLTYDSSWPTQKFKDPAMWP 218

  Fly   392 YTLDYKMPHSC-TGVNQNCPSRSYPGIW-ELVMNQLEVGEYMCGMVDTC--PPHLSGEDVYRMLT 452
            ||||||....| .|   .||..|.||.| ..::...:...|.|.|:|.|  ||....::::..:.
  Fly   219 YTLDYKSKQDCQIG---PCPEASIPGFWVNPMVTWTDTEGYSCSMIDACVYPPEDDMDELFDWMM 280

  Fly   453 HNFKRHYLSNRAPFGLYFHSTWFKK-VDYLNAFLKFLDDLQKLPDVFFVTNQQAIQWMRHPTPSN 516
            .||.||||.||||||:|.|:.||.: .:|..||.||::.|....||:|....:.::::|.||..:
  Fly   281 ENFNRHYLGNRAPFGMYLHAAWFSRGRNYFGAFKKFINHLNTYSDVYFTGISRMLEYVRKPTLGS 345

  Fly   517 QLHQFESWHCQPKDL-DPHEQVCNTPNVCKVRSRVLQEDRFFYTCMECPAQYPWIRNEFG 575
            ..          ||. |..|..|.... |.|:.....|:|:...|.:||:.|||:.|..|
  Fly   346 PF----------KDCPDLPEAECRAVQ-CHVQKMSTGEERYMTVCDKCPSVYPWLDNPLG 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChLD3NP_609806.1 CBM_14 <111..149 CDD:426342
LDLa 168..202 CDD:238060
CE4_CDA_like_1 243..512 CDD:200596 109/280 (39%)
Cda9NP_611192.1 CE4_CDA_like_2 72..341 CDD:200597 109/280 (39%)
Blue background indicates that the domain is not in the aligned region.

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