DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChLD3 and Cda5

DIOPT Version :10

Sequence 1:NP_609806.1 Gene:ChLD3 / 35002 FlyBaseID:FBgn0032598 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_722590.2 Gene:Cda5 / 33158 FlyBaseID:FBgn0051973 Length:1998 Species:Drosophila melanogaster


Alignment Length:364 Identity:159/364 - (43%)
Similarity:221/364 - (60%) Gaps:24/364 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 AGACDPRKCHLPQCFCSKDGTQIPGSLPAQSVPQMILLTFDDAINHDNWELFSKVLFTQHRRNPN 275
            |..|....|.||.|:|.  |..|||.||.:|:||::||||||::|..|.:|::. ||.:.|.|||
  Fly  1634 AAKCRKDVCLLPDCYCG--GRDIPGELPVESIPQIVLLTFDDSVNDLNKQLYTD-LFEKGRVNPN 1695

  Fly   276 GCPIKGTFYVSHPFTNYQYVQKLWNDGHEIAVHSVTHRGPEMWWSKNATIEDWFDEMVGQANIIN 340
            ||||..||||||.:|:|..||.|:.||||:|.|:|:|...|.:..|.     |..|:.||..|:.
  Fly  1696 GCPITATFYVSHEWTDYSQVQNLYADGHEMASHTVSHSFGEQFSQKK-----WTREIAGQREILA 1755

  Fly   341 KFAAVRMEEIRGMRVPFLRVGWNRQFLMMKEFGFVYDSSMVAPHSNPPLWPYTLDYKMPHSCTGV 405
            .:..|:|.::||||.|||.||.|:.:.|:.:..|.|||||....:.||.||||||||:.|.|  :
  Fly  1756 AYGGVKMSDVRGMRAPFLSVGGNKMYKMLYDSNFTYDSSMPVYENRPPSWPYTLDYKIFHDC--M 1818

  Fly   406 NQNCPSRSYPGIWELVM---NQLEVGEYMCGMVDTCPPHLSGEDVYRMLTHNFKRHYLSNRAPFG 467
            ...||:|||||:|::.|   ..|..|.  |.|.|.|......:.|.:|:..||:|||.:||||||
  Fly  1819 IPPCPTRSYPGVWQVPMVMWQDLNGGR--CSMGDACSNPSDADGVTKMIMKNFERHYTTNRAPFG 1881

  Fly   468 LYFHSTWFKKVDYLNAFLKFLDDLQKLPDVFFVTNQQAIQWMRHPTPSNQLHQFESWHCQPKDLD 532
            |::|:.||.:..:...|:||||.:..:.||:.:||.||:||:|.|||.::::.|:.:.|   |..
  Fly  1882 LFYHAAWFTQPHHKEGFIKFLDAINAMQDVWIITNWQALQWVRDPTPISRINSFQPFQC---DYS 1943

  Fly   533 PHEQVCNTPNVCKV--RSRVLQEDRFFYTCMECPAQYPW 569
            ...:.||.|.||.:  :|.|    |:..||..||..|||
  Fly  1944 DRPKRCNNPKVCNLWHKSGV----RYMKTCQPCPDIYPW 1978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChLD3NP_609806.1 CBM_14 <111..149 CDD:426342
LDLa 168..202 CDD:238060
CE4_CDA_like_1 243..512 CDD:200596 124/271 (46%)
Cda5NP_722590.2 CBM_14 58..106 CDD:426342
CE4_CDA_like_2 1664..1926 CDD:200597 124/271 (46%)
Blue background indicates that the domain is not in the aligned region.

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