DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChLD3 and chts-1

DIOPT Version :10

Sequence 1:NP_609806.1 Gene:ChLD3 / 35002 FlyBaseID:FBgn0032598 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001360756.1 Gene:chts-1 / 181010 WormBaseID:WBGene00018607 Length:2111 Species:Caenorhabditis elegans


Alignment Length:321 Identity:71/321 - (22%)
Similarity:108/321 - (33%) Gaps:116/321 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CPGENAYNANGQTGFTVKVVASAQRRSKP-----QPTARIPNAH--RLPSLCIWMMVALMIMSSS 60
            ||....|........||      |:..:|     |.:|..|.|:  ::...|::.|     ..||
 Worm    98 CPAGQTYIREAGVCMTV------QQPGEPCQYSQQCSALEPGAYCLKMRCECVYGM-----KKSS 151

  Fly    61 LDALVIDND----GIV---------------GNQTRHRRSTSGA---ASC-MQDARFYRN----- 97
            .....::||    |.:               |....|....|||   |:| ||......|     
 Worm   152 NGCTFVNNDCKERGHIFISEIGECREVFPPGGKGCSHNLQCSGAYPDATCFMQTCTCPPNLPVAA 216

  Fly    98 --------PNRPVHKIWT---------------NSECAKYF----------LCLDGEVFE-FKCS 128
                    ||..|:...|               :|:|...|          .|.:|.||: .|||
 Worm   217 DGTCGRSCPNNQVYSGVTGECLPEKQPGQDCIYSSQCQASFGGLVCDKNTCRCPNGLVFDGLKCS 281

  Fly   129 EGL-----LFDVVRQICDFKANVDNCDVSAETPAPKPLLEMAD-CADEYQLG--C-ADGTCLPQE 184
            .|.     :.|  ::||     |:.|        |..::|:|. |..:..:|  | |:..|....
 Worm   282 HGCPPHKRVID--KEIC-----VEGC--------PSGIVEVAGRCVKQVSIGQPCVANAQCNFGS 331

  Fly   185 YFCDGSVDCPDG---SDEGWCDVEHDPNAAGACDPRK-------CHLPQCFCSKDGTQIPG 235
            :...|:..||.|   .||....:|.:||.  :|...:       |:..:|.|.::...|.|
 Worm   332 FCQSGTCQCPPGFYVQDEQCQAIESEPNE--SCQNNEKCTKGSVCYNGKCSCPRNHELING 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChLD3NP_609806.1 CBM_14 <111..149 CDD:426342 14/53 (26%)
LDLa 168..202 CDD:238060 10/39 (26%)
CE4_CDA_like_1 243..512 CDD:200596
chts-1NP_001360756.1 EB 98..154 CDD:460294 15/66 (23%)
EB 224..280 CDD:460294 11/55 (20%)
EB 300..351 CDD:460294 15/58 (26%)
EB 340..392 CDD:460294 14/53 (26%)
EB <438..476 CDD:460294
EB 514..563 CDD:460294
EB 596..650 CDD:460294
EB 639..692 CDD:460294
EB 681..734 CDD:460294
EB 723..776 CDD:460294
EB 808..860 CDD:460294
EB 961..1019 CDD:460294
EB <1111..1150 CDD:460294
EB 1283..1340 CDD:460294
EB 1413..1473 CDD:460294
EB 1462..1517 CDD:460294
EB 1757..1812 CDD:460294
EB <1893..1930 CDD:460294
Blue background indicates that the domain is not in the aligned region.

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