DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChLD3 and verm

DIOPT Version :10

Sequence 1:NP_609806.1 Gene:ChLD3 / 35002 FlyBaseID:FBgn0032598 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_061510370.1 Gene:verm / 1280732 VectorBaseID:AGAMI1_002244 Length:540 Species:Anopheles gambiae


Alignment Length:497 Identity:222/497 - (44%)
Similarity:304/497 - (61%) Gaps:26/497 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 PNRPVHKIWTNSECAKYFLCLD-GE-----VFEFKCSEGLLFDVVRQICDFKANVDNCDVSAETP 156
            |.....::.|:.:|.:...|.| ||     :.:.:|..||.|||:||.||:|.||.:||:..:..
Mosquito    45 PGDEYFRLSTDGDCREVVRCDDAGENGITRLAKVRCPTGLYFDVLRQTCDWKTNVKSCDLLGKPR 109

  Fly   157 APKPLLEMAD-CADEYQLGCADGTCLPQEYFCDGSVDCPDGSDEGWCDVEHDPNAAGACDPRKCH 220
            ...|:|:..: ...|.:|.|.:|.|:.:|.||:|..||.|.|||..|.||.|||.|..||..:|.
Mosquito   110 KVLPILKTDEPICPEGKLSCGNGECIDKELFCNGKPDCKDESDENACTVELDPNRAPDCDTTQCV 174

  Fly   221 LPQCFCSKDGTQIPGSLPAQSVPQMILLTFDDAINHDNWELFSKVLFTQHRRNPNGCPIKGTFYV 285
            ||.||||.|||:|||::..|.|||||.:||:.|:|.||.:|:..: |...|:|||||.|:||::|
Mosquito   175 LPDCFCSADGTRIPGNIEPQQVPQMITITFNGAVNVDNIDLYEDI-FNGQRQNPNGCQIRGTYFV 238

  Fly   286 SHPFTNYQYVQKLWNDGHEIAVHSVTHRGPEMWWSKNATIEDWFDEMVGQANIINKFAAVRMEEI 350
            ||.:|||..||.|...||||:|.|:||:....:|:: .|.:||..||.|...|:.:||.:....|
Mosquito   239 SHKYTNYSAVQDLHRKGHEISVFSLTHKDDPTYWTQ-GTYDDWLAEMAGARLIVERFANITDGSI 302

  Fly   351 RGMRVPFLRVGWNRQFLMMKEFGFVYDSSMVAPHSNPPLWPYTLDYKMPHSCTGVNQNCPSRSYP 415
            .|:|.|:||||.|:||.||.:..||||:|:.|.....|:|||||.::|||.|.|...||||||:|
Mosquito   303 IGVRAPYLRVGGNKQFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPHKCNGNAHNCPSRSHP 367

  Fly   416 GIWELVMNQLE------VGEYM--CGMVDTCPPHLSGEDVYRMLTHNFKRHYLSNRAPFGLYFHS 472
             :||:|||:|:      ..|.:  |.|||:|....|||...|:|.|||.|||.:||||.||:||:
Mosquito   368 -VWEMVMNELDRRDDPTFDESLPGCHMVDSCSNIQSGEQFGRLLRHNFNRHYNTNRAPLGLHFHA 431

  Fly   473 TWFK-KVDYLNAFLKFLDDLQKLPDVFFVTNQQAIQWMRHPTPSNQLHQFESW--HCQPKDLDPH 534
            :|.| |.:|....:||::::....||||||..|.||||::||..|.|..|:.|  .|..|.    
Mosquito   432 SWLKSKKEYREELIKFIEEMLGRNDVFFVTMLQVIQWMQNPTELNALRDFQEWKEKCDVKG---- 492

  Fly   535 EQVCNTPNVCKVRSRVLQ-EDRFFYTCMECPAQYPWIRNEFG 575
            :..|:.||.|.:.:|.|. |....:||||||..||||.:..|
Mosquito   493 QPYCSLPNACPLTTRELPGETLRLFTCMECPNNYPWILDPTG 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChLD3NP_609806.1 CBM_14 <111..149 CDD:426342 18/43 (42%)
LDLa 168..202 CDD:238060 15/33 (45%)
CE4_CDA_like_1 243..512 CDD:200596 133/277 (48%)
vermXP_061510370.1 None

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