DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubp1 and nubp1

DIOPT Version :10

Sequence 1:NP_609805.1 Gene:Nubp1 / 35000 FlyBaseID:FBgn0032597 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_073796472.1 Gene:nubp1 / 503919 ZFINID:ZDB-GENE-050417-471 Length:360 Species:Danio rerio


Alignment Length:300 Identity:177/300 - (59%)
Similarity:218/300 - (72%) Gaps:6/300 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CPGVESEEAGKGSACSGCPNQGLCSDPNKKLEDPGKALVVESMKDVKHKLLILSGKGGVGKSTVT 73
            |||..|::|||.|||.|||||.:|:....|..||....:.:.|..||||:|:|||||||||||.:
Zfish    51 CPGTSSDQAGKSSACQGCPNQSICASGATKAPDPAIEEIKQKMTSVKHKILVLSGKGGVGKSTFS 115

  Fly    74 SLLTRYLARSNPDSNFGVLDIDICGPSQPRLMGALGESVHQSGYGWSPVGIEDNVCLMSIGFLLG 138
            :.|:..|| |:......:||:||||||.|::||..||.|||||.|||||.:|||:.:|||||||.
Zfish   116 AHLSHALA-SDSSKEVALLDVDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLAVMSIGFLLS 179

  Fly   139 SVDDAIIWRGPKKNGMIRQFLSEVDWGNLDLLLLDTPPGTSDEHLSVVSYLKDDANPESLRAVMV 203
            |.|||:|||||||||||:|||.:||||.:|.|::||||||||||||:|.|| ..|..:.  ||::
Zfish   180 SPDDAVIWRGPKKNGMIKQFLRDVDWGEVDYLIVDTPPGTSDEHLSIVQYL-SGAGIDG--AVII 241

  Fly   204 TTPQEVSLLDVRKEINFCKKQNIPIVGVIENMSSFRCGHCGNSSEIFPAKTGGAAAMCAEMGIPL 268
            ||||||||.||||||.||||.|:||:|||||||.|.|..|.|:|:|||..||||..||.|:.:||
Zfish   242 TTPQEVSLQDVRKEIRFCKKVNLPILGVIENMSGFVCPKCKNTSQIFPPTTGGAQRMCEELNLPL 306

  Fly   269 LGSLPLDQQISKACDSGED-LTEF-KNVTTEALEGICSKI 306
            ||.:|||.:|.|:||.|:. |||. .:....|.:.|..||
Zfish   307 LGRIPLDPRIGKSCDEGKSFLTEVPDSPAAAAYQSIVQKI 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nubp1NP_609805.1 ParA 53..307 CDD:431392 156/255 (61%)
nubp1XP_073796472.1 None

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