DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nubp1 and nubp2

DIOPT Version :10

Sequence 1:NP_609805.1 Gene:Nubp1 / 35000 FlyBaseID:FBgn0032597 Length:311 Species:Drosophila melanogaster
Sequence 2:XP_012825448.1 Gene:nubp2 / 100125178 XenbaseID:XB-GENE-999229 Length:270 Species:Xenopus tropicalis


Alignment Length:279 Identity:126/279 - (45%)
Similarity:183/279 - (65%) Gaps:19/279 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KKLEDPGKALVVESMKDVKHKLLILSGKGGVGKSTVTSLLTRYLARSNPDSNFGVLDIDICGPSQ 101
            ::.:|.|      ::..|:|.:|:|||||||||||:::.:.  ||..:.....|:||:|:||||.
 Frog     2 ERSQDGG------NLSGVQHIILVLSGKGGVGKSTISTEIA--LALRHAGKKVGILDVDLCGPSI 58

  Fly   102 PRLMGALGESVHQSGYGWSPVGI--EDNVCLMSIGFLLGSVDDAIIWRGPKKNGMIRQFLSEVDW 164
            ||::.|..:.|||...||.||.:  |.::.||||||||...|||::|||||||.:|:||.|:|.|
 Frog    59 PRMLNAQSKDVHQCDSGWVPVYVDQEKSISLMSIGFLLEHPDDAVVWRGPKKNALIKQFASDVAW 123

  Fly   165 GNLDLLLLDTPPGTSDEHLSVVSYLKDDANPESLRAVMVTTPQEVSLLDVRKEINFCKKQNIPIV 229
            |:||.|::||||||||||::.|..|: ..||  :.|::|||||.||:.|||:|:.||||..:.::
 Frog   124 GDLDFLIVDTPPGTSDEHIATVDALR-PFNP--MGALLVTTPQAVSVGDVRRELTFCKKTGLRVI 185

  Fly   230 GVIENMSSFRCGHCGNSSEIFPAKTGGAAAMCAEMGIPLLGSLPLDQQISKACDSGED-LTEFKN 293
            |::||||.:.|.||...:.||  ..||...:....|:|.||.:|||..:|::.:.|:| :.||.|
 Frog   186 GIVENMSGYVCPHCTECTNIF--SKGGGEELARLSGVPFLGCVPLDPLLSQSLEQGKDFVQEFPN 248

  Fly   294 -VTTEALEGICSKI--MAS 309
             ....|:..|..:|  |||
 Frog   249 SAAYPAISSIARQILDMAS 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nubp1NP_609805.1 ParA 53..307 CDD:431392 121/259 (47%)
nubp2XP_012825448.1 ParA 12..263 CDD:431392 120/257 (47%)

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