Protein Alignment CG5888 and lrrc38a

DIOPT Version :8

• Sequence 1: NP_001285981.1
• Gene: CG5888 / 34980
• FlyBaseID: FBgn0028523
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: XP_021325623.1
• Gene: lrrc38a / 567935
• ZFINID: ZDB-GENE-080327-12
• Length: 290
• Species: Danio rerio
• Alignment Length: 112
• Identity: 26/113 (23%)
• Similarity: 56/113 (50%)
• Gaps: 4/113 (4%)

  Fly   256 VPTELFWMSEQLAYIGIRSN-ISYLSKDFLKVQKKLLTLRLERNNIARLPDQLFRNTPLILEIHL 319
            :|::...:...|.|:.:|:| ::.|....|....:|:.|.|..||:..:|...|..:..::::.|
Zfish    69 IPSDFLVLYSDLVYLDLRNNSLTRLEPGTLSTSSRLVYLDLGSNNLTEIPSGTFGESRSLIKLRL 133

  Fly   320 AFNN--LDRIQSGLFDKLKNLQVLNLEHNPITTIALNAFTPIPTAHI 364
            . ||  |:.:....|..|.:|:.|.||.|.::.:.:...:.:|:..:
Zfish   134 G-NNPYLNMVSKDAFLGLTSLRELELESNALSGLDVEVLSQLPSLRV 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5888	NP_001285981.1	leucine-rich repeat	168..189	CDD:275380
		leucine-rich repeat	190..213	CDD:275380
		leucine-rich repeat	214..243	CDD:275380
		leucine-rich repeat	244..266	CDD:275380	1/10 (10%)
		leucine-rich repeat	267..289	CDD:275380	6/23 (26%)
		LRR_8	288..348	CDD:290566	18/62 (29%)
		leucine-rich repeat	290..313	CDD:275380	7/23 (30%)
		leucine-rich repeat	314..337	CDD:275380	6/25 (24%)
		leucine-rich repeat	338..357	CDD:275380	5/19 (26%)
lrrc38a	XP_021325623.1	LRRNT	26..56	CDD:214470
		leucine-rich repeat	36..58	CDD:275380
		leucine-rich repeat	59..79	CDD:275380	1/10 (10%)
		PLN00113	<60..>185	CDD:331614	26/113 (23%)
		leucine-rich repeat	80..103	CDD:275380	6/23 (26%)
		LRR_8	102..163	CDD:316378	18/62 (29%)
		leucine-rich repeat	104..127	CDD:275380	7/23 (30%)
		leucine-rich repeat	128..152	CDD:275380	6/25 (24%)
		leucine-rich repeat	153..176	CDD:275380	6/23 (26%)
		TPKR_C2	185..>219	CDD:326558

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR46473
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.100