Protein Alignment CG5888 and Lrrc26

DIOPT Version :10

• Sequence 1: NP_609794.1
• Gene: CG5888 / 34980
• FlyBaseID: FBgn0028523
• Length: 455
• Species: Drosophila melanogaster
• Sequence 2: NP_001014075.1
• Gene: Lrrc26 / 311803
• RGDID: 1308398
• Length: 334
• Species: Rattus norvegicus
• Alignment Length: 94
• Identity: 28/94 - (29%)
• Similarity: 42/94 - (44%)
• Gaps: 1/94 - (1%)

  Fly   255 NVPTELFWMSEQLAYIGIRSN-ISYLSKDFLKVQKKLLTLRLERNNIARLPDQLFRNTPLILEIH 318
            :|....||....|..:.:.|| :..||.......:.|..|.|..|.:|.|...:....||:..:.
  Rat   113 SVHARAFWGLGVLQRLDLSSNQLETLSPGTFTPLRALSFLSLAGNRLALLEPSILGPLPLLRVLS 177

  Fly   319 LAFNNLDRIQSGLFDKLKNLQVLNLEHNP 347
            |..|:|..:::||.:.|..|.||.|..||
  Rat   178 LQDNSLSALEAGLLNSLPALDVLRLHGNP 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5888	NP_609794.1	LRR	<160..>359	CDD:443914	28/94 (30%)
		leucine-rich repeat	168..189	CDD:275380
		leucine-rich repeat	190..213	CDD:275380
		leucine-rich repeat	214..243	CDD:275380
		leucine-rich repeat	244..266	CDD:275380	3/10 (30%)
		leucine-rich repeat	267..289	CDD:275380	5/22 (23%)
		leucine-rich repeat	290..313	CDD:275380	6/22 (27%)
		leucine-rich repeat	314..337	CDD:275380	6/22 (27%)
		leucine-rich repeat	338..357	CDD:275380	6/10 (60%)
Lrrc26	NP_001014075.1	LRR	<76..>205	CDD:443914	26/91 (29%)
		LRR 1	76..97
		leucine-rich repeat	77..100	CDD:275380
		LRR 2	100..121		2/7 (29%)
		leucine-rich repeat	101..124	CDD:275380	3/10 (30%)
		LRR 3	124..145		5/20 (25%)
		leucine-rich repeat	125..148	CDD:275380	5/22 (23%)
		LRR 4	148..169		6/20 (30%)
		leucine-rich repeat	149..172	CDD:275380	6/22 (27%)
		LRR 5	172..194		6/21 (29%)
		leucine-rich repeat	173..196	CDD:275380	6/22 (27%)
		PCC	178..>295	CDD:188093	12/29 (41%)
		leucine-rich repeat	197..239	CDD:275380	6/10 (60%)
		leucine-rich repeat	240..259	CDD:275380
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	312..334