DRSC/TRiP Functional Genomics Resources

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Protein Alignment jhamt and pmt-1

DIOPT Version :10

Sequence 1:NP_609793.2 Gene:jhamt / 34977 FlyBaseID:FBgn0028841 Length:297 Species:Drosophila melanogaster
Sequence 2:NP_494991.1 Gene:pmt-1 / 173901 WormBaseID:WBGene00022781 Length:484 Species:Caenorhabditis elegans


Alignment Length:288 Identity:52/288 - (18%)
Similarity:104/288 - (36%) Gaps:89/288 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DISSQMVHYASKHYQREERTRF----------QVLDIGCERLPEELSGRFDHVTSFYCLHWV--- 119
            |.:|.|::::::..:..:|...          .|:|||..      .|||..|.: ....||   
 Worm    45 DTNSMMLNHSAEELESSDRADILASLPLLHNKDVVDIGAG------IGRFTTVLA-ETARWVLST 102

  Fly   120 ----------QNLKGALGNI-YNL-----LKPEGG-------DCLLAFLASNPVYE-VYKILK-- 158
                      |.....|||| |.:     ||.|..       :.|:.:|:.....| ::..::  
 Worm   103 DFIDSFIKKNQERNAHLGNINYQVGDAVGLKMESNSVDLVFTNWLMMYLSDEETVEFIFNCMRWL 167

  Fly   159 ----------------TNDKWSTFMQDVENFISPLHYSLSPGEEFSQLLNDVGFVQHNVEIRNEV 207
                            |....:..|.|..| .:|.||..|     |..:|.:..:::. ::.|::
 Worm   168 RSHGIVHLRESCSEPSTGRSKAKSMHDTAN-ANPTHYRFS-----SLYINLLRAIRYR-DVDNKL 225

  Fly   208 FVYE-----GVRTL---KDNVKAICPFLERMPAD--LHEQFLDDFIDIVISMNLQQGENN----- 257
            :.:.     .|.|.   .:|.:.:....|::||:  ......::.::::  .|..|.|..     
 Worm   226 WRFNVQWSCSVPTYIKRSNNWRQVHWLAEKVPAEDGAKGTSFNELVELI--KNTWQNEQEAWDAK 288

  Fly   258 -EDQKFLSPYKLVVAYARKTPEFVNNVF 284
             :|:|::...|:..:.....|.  |:.|
 Worm   289 LDDEKYVWTDKVFSSALTSLPS--NSTF 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jhamtNP_609793.2 Methyltransf_12 40..137 CDD:400515 22/97 (23%)
pmt-1NP_494991.1 PLN02336 39..>260 CDD:177970 43/228 (19%)

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