DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4278 and NIF3

DIOPT Version :9

Sequence 1:NP_609790.1 Gene:CG4278 / 34970 FlyBaseID:FBgn0014092 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_011294.1 Gene:NIF3 / 852651 SGDID:S000003189 Length:288 Species:Saccharomyces cerevisiae


Alignment Length:284 Identity:105/284 - (36%)
Similarity:159/284 - (55%) Gaps:26/284 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KLAAVVKELENFAPTSWAEK-WDNVGLLIE------PHREKQIK-KILLTNDLTEPVVKEALEKE 68
            :|..:|:.:..|.|..:|:| |||.||||:      ...:...| |:|||.|||:.|.:||::..
Yeast     9 QLDKLVRSITKFYPQKYADKSWDNTGLLIDCSTAQVTTADANAKTKVLLTVDLTKSVAQEAVDAN 73

  Fly    69 AELIISYHPPIFKPLTRIT-QSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKAV---- 128
            ..:|::|||.||....|:: .::.:.......:...|::|.||||.|...|||||||.:.:    
Yeast    74 CNVIVAYHPFIFPSWNRLSPHTNPQHETAIKLIQYGISVYCPHTAVDAARGGVNDWLVRGLNNGE 138

  Fly   129 NIISIRPLEPELGAPPG-TGSGRYIETKMELS--QVVESLQKRIRNSVHVALAVGHTP----KTL 186
            |:.....||...|.... .|.||::|...::|  |:|::: ||:....:|.:|....|    :..
Yeast   139 NVAKSYALETVSGETDDLIGYGRFVEFNKDISLEQIVKNV-KRVLRVPYVQVASLAAPSAWNQLK 202

  Fly   187 IQSVGICAGSGASLLKGIQ--ADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFLHEFCPIL 249
            |:.|.:|||||:.:.|.::  .||..||||||||||::.....||::|||||:|||||.:....|
Yeast   203 IKKVAVCAGSGSGVFKQLKEDVDLYYTGEMSHHEVLKWKEMGKTVIVCNHSNTERGFLQDVMKGL 267

  Fly   250 AKSLNEECLVFVSEVDKDPLVTVA 273
            .:....|  |.||::|.||| |||
Yeast   268 LQDEGHE--VVVSKMDCDPL-TVA 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4278NP_609790.1 NIF3 16..251 CDD:280036 93/256 (36%)
NIF3NP_011294.1 YbgI_SA1388 8..284 CDD:213534 99/277 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346697
Domainoid 1 1.000 143 1.000 Domainoid score I1003
eggNOG 1 0.900 - - E1_COG0327
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5881
Inparanoid 1 1.050 151 1.000 Inparanoid score I1125
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54155
OrthoFinder 1 1.000 - - FOG0005738
OrthoInspector 1 1.000 - - oto99882
orthoMCL 1 0.900 - - OOG6_102764
Panther 1 1.100 - - LDO PTHR13799
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R811
SonicParanoid 1 1.000 - - X4727
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.