DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4278 and NIF3

DIOPT Version :10

Sequence 1:NP_609790.1 Gene:CG4278 / 34970 FlyBaseID:FBgn0014092 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_011294.1 Gene:NIF3 / 852651 SGDID:S000003189 Length:288 Species:Saccharomyces cerevisiae


Alignment Length:284 Identity:105/284 - (36%)
Similarity:159/284 - (55%) Gaps:26/284 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KLAAVVKELENFAPTSWAEK-WDNVGLLIE------PHREKQIK-KILLTNDLTEPVVKEALEKE 68
            :|..:|:.:..|.|..:|:| |||.||||:      ...:...| |:|||.|||:.|.:||::..
Yeast     9 QLDKLVRSITKFYPQKYADKSWDNTGLLIDCSTAQVTTADANAKTKVLLTVDLTKSVAQEAVDAN 73

  Fly    69 AELIISYHPPIFKPLTRIT-QSHWKERVVAACLANDIALYSPHTAWDKKSGGVNDWLSKAV---- 128
            ..:|::|||.||....|:: .::.:.......:...|::|.||||.|...|||||||.:.:    
Yeast    74 CNVIVAYHPFIFPSWNRLSPHTNPQHETAIKLIQYGISVYCPHTAVDAARGGVNDWLVRGLNNGE 138

  Fly   129 NIISIRPLEPELGAPPG-TGSGRYIETKMELS--QVVESLQKRIRNSVHVALAVGHTP----KTL 186
            |:.....||...|.... .|.||::|...::|  |:|::: ||:....:|.:|....|    :..
Yeast   139 NVAKSYALETVSGETDDLIGYGRFVEFNKDISLEQIVKNV-KRVLRVPYVQVASLAAPSAWNQLK 202

  Fly   187 IQSVGICAGSGASLLKGIQ--ADLIITGEMSHHEVLEFTHNNTTVLLCNHSNSERGFLHEFCPIL 249
            |:.|.:|||||:.:.|.::  .||..||||||||||::.....||::|||||:|||||.:....|
Yeast   203 IKKVAVCAGSGSGVFKQLKEDVDLYYTGEMSHHEVLKWKEMGKTVIVCNHSNTERGFLQDVMKGL 267

  Fly   250 AKSLNEECLVFVSEVDKDPLVTVA 273
            .:....|  |.||::|.||| |||
Yeast   268 LQDEGHE--VVVSKMDCDPL-TVA 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4278NP_609790.1 NIF3 16..251 CDD:426431 93/256 (36%)
NIF3NP_011294.1 YbgI_SA1388 8..284 CDD:213534 99/277 (36%)

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