DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GMF and Y50D7A.10

DIOPT Version :10

Sequence 1:NP_609787.2 Gene:GMF / 34963 FlyBaseID:FBgn0028894 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_871652.2 Gene:Y50D7A.10 / 259487 WormBaseID:WBGene00021758 Length:138 Species:Caenorhabditis elegans


Alignment Length:131 Identity:57/131 - (43%)
Similarity:90/131 - (68%) Gaps:0/131 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ICDISNEVLEELKKFRFSKSKNNAALILKVDREKQTVVLDEFIDDISVDELQDTLPGHQPRYVIY 70
            ||.|.:.|.|:|||||||||....|||||:|||...:..::.::|.|::|.::.||..|||:::.
 Worm     7 ICSIPDGVKEDLKKFRFSKSTTMNALILKIDRESHELQSEQLLNDCSIEEFKEELPSQQPRFILL 71

  Fly    71 TYKMVHDDQRISYPMCFIFYTPRDSQIELQMMYACTKSALQREVDLTRVYEIRELDELTEEWLKA 135
            ::...|.|:||||||..|:|.|..|..||||:||.:::.:..|..:::..|||::||:.:|.|::
 Worm    72 SWCKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNECHVSKNTEIRDIDEIDDELLES 136

  Fly   136 K 136
            |
 Worm   137 K 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GMFNP_609787.2 ADF_GMF-beta_like 8..129 CDD:200439 52/120 (43%)
Y50D7A.10NP_871652.2 ADF_GMF-beta_like 9..130 CDD:200439 52/120 (43%)

Return to query results.
Submit another query.