DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment twe and cdc-25.3

DIOPT Version :10

Sequence 1:NP_476633.1 Gene:twe / 34954 FlyBaseID:FBgn0002673 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_498972.1 Gene:cdc-25.3 / 176260 WormBaseID:WBGene00000388 Length:316 Species:Caenorhabditis elegans


Alignment Length:171 Identity:62/171 - (36%)
Similarity:91/171 - (53%) Gaps:25/171 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 ISSDTLARLIQG----EFDEQLGSQGGYEIIDCRYPYEFLGGHIRGAKNLYTRGQIQEAFPTLTS 306
            |:|:||..::|.    ||.::      |.:|||||.||:.||||:||::|:......:.|.....
 Worm   119 ITSETLIEIMQKLSQIEFMQK------YILIDCRYDYEYNGGHIKGAQSLFNPETAADFFFNKDG 177

  Fly   307 NQENRRIYVFHCEFSSERGPKLLRYLRSNDRSQHTHNYPALDYPELYILHNGYKEFF----GLYS 367
            :::..||.:|:||:|.:|||.:...||..||..:::.||..||.|:|:|..|||.|:    ||..
 Worm   178 SKKINRIPIFYCEYSQKRGPTMANNLREVDRKLNSNIYPRCDYEEIYLLEGGYKNFYAFTRGLEK 242

  Fly   368 ----QLCQPSQYVPMLAPAHNDEFR--YFRAKT-----KSW 397
                |||:|..||.|....:..|.|  .|..|.     |.|
 Worm   243 EQRVQLCEPDNYVIMFDDRYKAELRKHQFHKKNVSKPMKKW 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tweNP_476633.1 Cdc25 243..363 CDD:238788 46/120 (38%)
cdc-25.3NP_498972.1 Cdc25 116..235 CDD:238788 47/121 (39%)

Return to query results.
Submit another query.