DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Ia and beat-IIa

DIOPT Version :10

Sequence 1:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_524384.3 Gene:beat-IIa / 42086 FlyBaseID:FBgn0038498 Length:431 Species:Drosophila melanogaster


Alignment Length:447 Identity:141/447 - (31%)
Similarity:197/447 - (44%) Gaps:102/447 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FPQNAYQTALTTILLALTLEMTAALRDVRVRV-PHAVRRSEKAILKCFYDIEDDSLYSVKWYKGR 66
            ||.......|..:||::.| :..|||:|.:.: |.||||.:..:|:|.||::...|||.|:|:|:
  Fly    45 FPARCLLLLLGVLLLSMEL-VECALRNVNLIIEPPAVRRGQHVVLRCMYDLDGAPLYSAKFYRGQ 108

  Fly    67 REFYRYTPKETPPMKVFHFPGVKVRRVSSNESQVVLDAVTMATSGKYSCEVSADAPSFHTLIAAA 131
            .|||||||.|.|..|||.|||:.|...|||.:||:|..|....||.:||||:||||.|.|..|..
  Fly   109 LEFYRYTPGEFPNTKVFPFPGIHVDVSSSNATQVLLRNVGFGLSGNFSCEVTADAPLFSTATAVD 173

  Fly   132 ELEVIETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNN---EEVNPALVRHHKIL 193
            .::|:|.|...|.:.....||..||:||.||::..|||.|.||:|:||   ..|:...:|....|
  Fly   174 TMQVVELPEKRPQVFTEHTRYEPGDVLRANCSTPPSRPRAELTFTINNMVITHVDTEYIRTIDNL 238

  Fly   194 RDARNDMETAVVGIHF-VVTDQHFDN---------------------GKLKLRCSAQLHDVY--W 234
            ...|..::..:.|||| .|....::|                     |.|.||||||:.|:|  :
  Fly   239 IATRISLKMQLQGIHFSSVNPAIYNNVYGLNSVYGHGGPVYAPNSNPGGLLLRCSAQIGDLYQEY 303

  Fly   235 KTTEKIILETDLFPKHGNGANGNHVNPDDFYDQYALHEDHLHNKKNSYLTQLQEFFFYHFVPSGE 299
            |..|....:.|..|.                 :..|..|          |.|:.||..:|..|  
  Fly   304 KEIELGTPQKDPVPA-----------------RVTLSSD----------TSLKNFFSSYFSTS-- 339

  Fly   300 EDDGTEGGLGDGGAAWRGAGSSSSRLSPSSSQSCWMVGGSLMAVLSWTLARQLVSPLQAMMTKTG 364
                               .|::|||.|          |..||.|...:...|...::|..    
  Fly   340 -------------------ASAASRLLP----------GVYMAPLIMAMLASLFRLIEAAF---- 371

  Fly   365 GATCNMSGRCASRRTRAHGMRVSATKQKQKQRQMQQEHRKSCLRVSKSS-----WKG 416
             ..|:.|.:....:| .|.|..|..:::.|:|....   .|| .|||:|     |.|
  Fly   372 -EPCDASSQDPQSQT-GHSMEHSKERREPKERPALV---SSC-SVSKASRQQLAWPG 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IaNP_001285975.1 Ig 42..118 CDD:472250 38/75 (51%)
Ig strand B 44..48 CDD:409353 1/3 (33%)
Ig strand C 59..63 CDD:409353 2/3 (67%)
Ig strand E 98..102 CDD:409353 2/3 (67%)
Ig strand F 112..117 CDD:409353 2/4 (50%)
Ig 143..240 CDD:472250 40/123 (33%)
Ig strand B 158..162 CDD:409353 2/3 (67%)
Ig strand C 172..176 CDD:409353 2/3 (67%)
Ig strand E 205..209 CDD:409353 2/3 (67%)
Ig strand F 222..227 CDD:409353 3/4 (75%)
Ig strand G 235..238 CDD:409353 1/2 (50%)
beat-IIaNP_524384.3 None

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