DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Ia and beat-IIb

DIOPT Version :10

Sequence 1:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_650613.2 Gene:beat-IIb / 42082 FlyBaseID:FBgn0038494 Length:407 Species:Drosophila melanogaster


Alignment Length:356 Identity:109/356 - (30%)
Similarity:162/356 - (45%) Gaps:80/356 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ILLALTLEM-TAALRDVRVRV-PHAVRRSEKAILKCFYDIEDDSLYSVKWYKGRREFYRYTPKET 77
            :||.|..:. .||||||.:.| |.||||.:...|:|.|.:.:..|||:|:|:|:.|||||||.|.
  Fly    83 LLLCLFCDFGQAALRDVNLLVEPPAVRRGQSVALRCDYQLVEAPLYSIKFYRGQMEFYRYTPGEY 147

  Fly    78 PPMKVFHFPGVKVRRVSSNESQVVLDAVTMATSGKYSCEVSADAPSFHTLIAAAELEVIETPHNA 142
            ||.|||.|||::|....||.:.|::..|:...||::||||:||||.:.|..|.|:::|:|.|...
  Fly   148 PPTKVFQFPGIRVDENGSNATTVLIRNVSFGLSGQFSCEVTADAPLYSTATAFAQMQVVEFPEKR 212

  Fly   143 PFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKILRD------ARNDME 201
            |.:.....||..||:||.||::..|||.|:|.:|:||..|:.......:.:|.      :|..::
  Fly   213 PQLFTEHSRYEPGDVLRANCSTLPSRPRADLRFTINNIPVSIPFTEETQYIRTVDSLIASRLSLK 277

  Fly   202 TAVVGIHFVVTDQHFDNGK-------------------------------LKLRCSAQLHDVY-- 233
            ..:...|||.......||.                               |.|||:||:.|:|  
  Fly   278 LQLQATHFVAGLSAHGNGNGNGNGNGNGNGNGLANALHLGGGGGGAGGGGLILRCTAQIGDLYQE 342

  Fly   234 WKTTEKIILETDLFPKHGNGANGNHVNPDDFYDQYALHEDHLHNKKNSYLTQLQEFFFYHFVPSG 298
            :|..|....:.|..|.....::|                           |.|:.|...:|..| 
  Fly   343 YKEIELGTPQKDPVPARVTLSSG---------------------------TGLRGFLETYFATS- 379

  Fly   299 EEDDGTEGGLGDGGAAWRGAGSSSSRLSPSS 329
                       .|.:.|||:....:...|::
  Fly   380 -----------SGPSNWRGSAGVVAIFLPTA 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IaNP_001285975.1 Ig 42..118 CDD:472250 35/75 (47%)
Ig strand B 44..48 CDD:409353 1/3 (33%)
Ig strand C 59..63 CDD:409353 2/3 (67%)
Ig strand E 98..102 CDD:409353 1/3 (33%)
Ig strand F 112..117 CDD:409353 2/4 (50%)
Ig 143..240 CDD:472250 35/135 (26%)
Ig strand B 158..162 CDD:409353 2/3 (67%)
Ig strand C 172..176 CDD:409353 1/3 (33%)
Ig strand E 205..209 CDD:409353 0/3 (0%)
Ig strand F 222..227 CDD:409353 3/4 (75%)
Ig strand G 235..238 CDD:409353 1/2 (50%)
beat-IIbNP_650613.2 IG_like 108..198 CDD:214653 44/89 (49%)

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