DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beat-Ia and beat-Vb

DIOPT Version :8

Sequence 1:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001262511.1 Gene:beat-Vb / 41583 FlyBaseID:FBgn0038092 Length:328 Species:Drosophila melanogaster

Alignment Length:253 Identity:73/254 (29%)
Similarity:109/254 (43%) Gaps:49/254 (19%)


  Fly    16 LLALTLEMTAALRDVR------VRVPHAVRRSEKAILKCFYDIEDDSLYSVKWYKGRREFYRYTP 74
            ||.|.:.|...:|.::      :.||..|...:...|.|.|||...:|.||||||..:||:||:|
  Fly     7 LLQLGVHMLLVVRRIQCLRVTDINVPQIVDFRDNVTLSCSYDISGHTLNSVKWYKNGKEFFRYSP 71

  Fly    75 KETPPMKV-FHFPGVKV----RRVSSNESQVVLDAVTMATSGKYSCEVSADAPSFHTLIAAAELE 134
            . |||..: |...||::    ...:.:..:|.|:.:.:.:||.|.||||.|||.|......|.:.
  Fly    72 L-TPPTYIPFAVEGVQLIDDGNECNESSCRVELNLLGVKSSGVYRCEVSGDAPHFQLTARDANMT 135

  Fly   135 VIETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKILRDARND 199
            |...|.|.|.|:.....||..|.:..||::..|.....:||.||..:|:         |.|....
  Fly   136 VEALPQNNPLISSFHSTYRFNDFVEVNCSTDFSSLFTRITWYVNGIKVS---------LVDLLPS 191

  Fly   200 METAVVG-----------IHFVVTDQHFDNGK-----------------LKLRCSAQL 229
            .||.:|.           ::|...:..|...:                 |:|||.|::
  Fly   192 FETTIVAHGYSMRRIVSQLNFYANEPRFHQLQLQKLIQQKRTISPARLGLELRCVAEI 249

Known Domains:


GeneSequenceDomainRegion External IDIdentity
beat-IaNP_001285975.1 Ig 32..118 CDD:299845 34/91 (37%)
Ig 161..240 CDD:299845 20/98 (20%)
beat-VbNP_001262511.1 IG_like 39..121 CDD:214653 32/83 (39%)
Ig 41..130 CDD:143165 36/90 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C124149120
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0001856
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR21261
RoundUp 00.000 Not matched by this tool.
33.030

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