DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-Ia and beat-Vc

DIOPT Version :10

Sequence 1:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster
Sequence 2:NP_001356887.1 Gene:beat-Vc / 41575 FlyBaseID:FBgn0038084 Length:297 Species:Drosophila melanogaster


Alignment Length:359 Identity:98/359 - (27%)
Similarity:145/359 - (40%) Gaps:91/359 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALTTILLALTLEMTAALRDV--------RVRVPHAVRRSEKAILKCFYDIEDDSLYSVKWYKGRR 67
            :|..:|.||.|.....:..|        .:.||..:..::||.|.|.|.:.:.:|.||||||...
  Fly     2 SLLRLLGALLLATFNGMAPVPAEGLHLSNLSVPRIIDVAQKAKLFCSYAMGNRTLNSVKWYKDGL 66

  Fly    68 EFYRYTPKETPPMKVFHFPGVKVRRVSSNESQ----VVLDAVTMATSGKYSCEVSADAPSFHTLI 128
            ||:||:|...|....|...||.:...|.:.:|    |.|:.:|..:||:|.||||.|||.|..:.
  Fly    67 EFFRYSPLTPPTTNWFPVKGVTIADGSPHCNQFICNVELEKLTAHSSGQYRCEVSGDAPEFKLID 131

  Fly   129 AAAELEVIETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKIL 193
            ..|.:.|...|...|||:|:|..|:..|.|..||::..|.|.|.|||.:||:.. |.    |. |
  Fly   132 QTANMTVGVLPKFDPFISGVRHAYKYHDYLEANCSTEMSSPMAKLTWYINNKTA-PG----HS-L 190

  Fly   194 RDARNDMETAVVGIHFVVT---------DQHF--DNGKLKLRCSAQLHDVYWKTTEKIILETDLF 247
            :...|::...|.|.|...:         ||.|  .:..|:|||:|.:..:.....|..:..|.| 
  Fly   191 QPQINEVSRNVDGFHLFASHLHLRLHLDDQRFISKSEMLELRCTADIMGLAAVRRESRVRTTIL- 254

  Fly   248 PKHGNGANGNHVNPDDFYDQYALHEDHLHNKKNSYLTQLQEFFFYHFVPSGEEDDGTEGGLGDGG 312
                                 ||                             .|.||:..|.:.|
  Fly   255 ---------------------AL-----------------------------RDAGTKQRLTENG 269

  Fly   313 AAWRGAGSSSSRLSPSSSQSCWMVGGSLMAVLSW 346
            :...|         ..:|.:.|::  ||:.:|.|
  Fly   270 SCMTG---------QPASLAAWLL--SLVHILRW 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IaNP_001285975.1 Ig 42..118 CDD:472250 31/79 (39%)
Ig strand B 44..48 CDD:409353 2/3 (67%)
Ig strand C 59..63 CDD:409353 3/3 (100%)
Ig strand E 98..102 CDD:409353 2/7 (29%)
Ig strand F 112..117 CDD:409353 2/4 (50%)
Ig 143..240 CDD:472250 34/107 (32%)
Ig strand B 158..162 CDD:409353 1/3 (33%)
Ig strand C 172..176 CDD:409353 2/3 (67%)
Ig strand E 205..209 CDD:409353 1/3 (33%)
Ig strand F 222..227 CDD:409353 3/4 (75%)
Ig strand G 235..238 CDD:409353 0/2 (0%)
beat-VcNP_001356887.1 None

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