DRSC/TRiP Functional Genomics Resources

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Protein Alignment BicC and AT5G23680

DIOPT Version :10

Sequence 1:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_197757.1 Gene:AT5G23680 / 832433 AraportID:AT5G23680 Length:295 Species:Arabidopsis thaliana


Alignment Length:346 Identity:80/346 - (23%)
Similarity:117/346 - (33%) Gaps:99/346 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   558 MVAGGQSNNGNYLQVPGAVAPPLKPPTVSPRNSCSQNTSGYQSFSSSTTSLEQSYPPYAQLPGTV 622
            :|.|.|.|.|   .:|.|:...::.|          .||.....|..:..|.:   |..:|    
plant     6 LVEGHQINGG---FIPPAIINSIEAP----------ETSAAAGVSVGSKRLRR---PSVRL---- 50

  Fly   623 SSTSSSTAGSQNRAHY-----SPDSTYGSEGGGVGGGGGGGAR------LGRRLSDGVLLGLSN- 675
                ....|.|...|.     ||...........|||||||.|      .|:..|......::| 
plant    51 ----GDIGGDQYHQHVVAAYDSPQVRRPKWRPSGGGGGGGGNRKEPNNQSGKTTSSSRTRTMTNL 111

  Fly   676 SNGGGGNSGGAHLLPGSAESYRSLHYDLGGNKHSGHRAFDFDMKRALGYKAMERTPVAGELRTPT 740
            |:||..|:|.....|.|..|:|...:    .|.||                       ||....|
plant   112 SSGGYENTGTLDEDPVSIGSWRVKKW----VKSSG-----------------------GETAATT 149

  Fly   741 TAWMGMGLSSTSPAPAPLENGENGAAGGGASSGWRLPPG----------LGSPYGLSATTGLLDA 795
            |         |:.|.|............|...|.....|          ||...|....:.....
plant   150 T---------TNTASAKRVRSNWATRNDGVEQGDEKFSGEEEEEEEDEELGGEEGFRDFSREDSE 205

  Fly   796 TPVNRRMQLAKHKDIQTL----------------LTSLGLEHYIKIFVLNEIDLEVFTTLTEENL 844
            :|:..|.:. ::::::.|                |..|||..|..:|.::|:|.:|...||.|:|
plant   206 SPMKERRRY-ENREVELLGDWQSGGRGKEGVKIWLQELGLGRYWPMFEMHEVDEQVLPLLTLEDL 269

  Fly   845 MELGIAAFGARKKLLTAIHTL 865
            .::||.|.|:|:|:..||..|
plant   270 KDMGINAVGSRRKMYCAIQKL 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 KH-I_BICC1_rpt1 85..166 CDD:411848
KH-I_BICC1_rpt2 171..240 CDD:411849
KH-I_BICC1_rpt3 325..393 CDD:411850
SAM_BICC1 805..868 CDD:188919 23/77 (30%)
AT5G23680NP_197757.1 SAM_superfamily 235..289 CDD:188886 21/53 (40%)
Blue background indicates that the domain is not in the aligned region.

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