DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: BicC and AT5G23680

Sequence 1:NP_476865.1 Gene:BicC FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_197757.1 Gene:AT5G23680 AraportID:AT5G23680 Length:295 Species:Arabidopsis thaliana

Alignment Length:346 Identity:80/347 (23%)
Similarity:117/347 (34%) Gaps:99/347 (29%)


  Fly   558 MVAGGQSNNGNYLQVPGAVAPPLKPPTVSPRNSCSQNTSGYQSFSSSTTSLEQSYPPYAQLPGTV 622
            :|.|.|.|.|   .:|.|:...::.|          .||.....|..:..|.:   |..:|    
plant     6 LVEGHQINGG---FIPPAIINSIEAP----------ETSAAAGVSVGSKRLRR---PSVRL---- 50

  Fly   623 SSTSSSTAGSQNRAHY-----SPDSTYGSEGGGVGGGGGGGAR------LGRRLSDGVLLGLSN- 675
                ....|.|...|.     ||...........|||||||.|      .|:..|......::| 
plant    51 ----GDIGGDQYHQHVVAAYDSPQVRRPKWRPSGGGGGGGGNRKEPNNQSGKTTSSSRTRTMTNL 111

  Fly   676 SNGGGGNSGGAHLLPGSAESYRSLHYDLGGNKHSGHRAFDFDMKRALGYKAMERTPVAGELRTPT 740
            |:||..|:|.....|.|..|:|...:    .|.||                       ||....|
plant   112 SSGGYENTGTLDEDPVSIGSWRVKKW----VKSSG-----------------------GETAATT 149

  Fly   741 TAWMGMGLSSTSPAPAPLENGENGAAGGGASSGWRLPPG----------LGSPYGLSATTGLLDA 795
            |         |:.|.|............|...|.....|          ||...|....:.....
plant   150 T---------TNTASAKRVRSNWATRNDGVEQGDEKFSGEEEEEEEDEELGGEEGFRDFSREDSE 205

  Fly   796 TPVNRRMQLAKHKDIQTL----------------LTSLGLEHYIKIFVLNEIDLEVFTTLTEENL 844
            :|:..|.:. ::::::.|                |..|||..|..:|.::|:|.:|...||.|:|
plant   206 SPMKERRRY-ENREVELLGDWQSGGRGKEGVKIWLQELGLGRYWPMFEMHEVDEQVLPLLTLEDL 269

  Fly   845 MELGIAAFGARKKLLTAIHTL 865
            .::||.|.|:|:|:..||..|
plant   270 KDMGINAVGSRRKMYCAIQKL 290

Known Domains:


GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 vigilin_like_KH 174..240 CDD:239087
vigilin_like_KH 327..393 CDD:239087
SAM_BICC1 805..868 CDD:188919 23/78 (29%)
SAM 807..867 CDD:197735 23/76 (30%)
AT5G23680NP_197757.1 SAM_superfamily 235..289 CDD:188886 21/54 (39%)
SAM 238..290 CDD:197735 21/52 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 1 1.000 T124585
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR10627
Phylome 00.000 Not matched by this tool.
22.100

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