DRSC/TRiP Functional Genomics Resources

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Protein Alignment BicC and AT3G11890

DIOPT Version :10

Sequence 1:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_974290.1 Gene:AT3G11890 / 820362 AraportID:AT3G11890 Length:527 Species:Arabidopsis thaliana


Alignment Length:249 Identity:55/249 - (22%)
Similarity:89/249 - (35%) Gaps:36/249 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 DDTHTHIHFPDSNRSNPTEKSNQVSLCGSLEGVERARALVRLSTPLLISFEMPVMGPNKPQPDHE 264
            |.|..|...|  :...|....:|..|..:|........:..:..|.|...|..::  :||:..| 
plant    75 DSTFVHTVVP--SLPLPETPQSQAELRDALADTHFTTPVPTVVVPALPLPEQFIL--HKPETSH- 134

  Fly   265 TPYIKMIETKFNVQVIFSTRPKLHTSLVLVKGSEKESAQVRDATQLLINFACESIA-SQILVNVQ 328
                ..::.:..:.....|.| |||.:..:..:|..:.|...::|..:... |||| :.....:|
plant   135 ----SQVQFRDCIANTHKTTP-LHTVVHSLPVTEHSTLQKPTSSQSQVELR-ESIADTHGTTPLQ 193

  Fly   329 MEIS----PQHHEIVKGKNNVNLLSIMERTQTKIIFPDLSDMNVKPLKK-----SQVTISGRIDD 384
            .|||    |||..:.|...:.:.....|.|....|.|.|....:..|:|     ||..:......
plant   194 TEISSLPLPQHFVLQKPATSQSQADTHETTLLHTILPSLPVPELCTLQKPATSQSQAELRANTRK 258

  Fly   385 VYLARQQLLGNLPVALIFDF--PDNHNDASEIMSLNTKYGVYITLRQKQRQSTL 436
            ..|.....:.:|||...:..  |......:|             ||.|.|::||
plant   259 ATLVHAAAMPSLPVPEHYSLQKPSTSQSQAE-------------LRAKTRKATL 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BicCNP_476865.1 KH-I_BICC1_rpt1 85..166 CDD:411848
KH-I_BICC1_rpt2 171..240 CDD:411849 8/39 (21%)
KH-I_BICC1_rpt3 325..393 CDD:411850 18/76 (24%)
SAM_BICC1 805..868 CDD:188919
AT3G11890NP_974290.1 SAM_2 460..516 CDD:429573
Blue background indicates that the domain is not in the aligned region.

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