DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gli and Ces2a

DIOPT Version :10

Sequence 1:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_653344.1 Gene:Ces2a / 246252 RGDID:708353 Length:558 Species:Rattus norvegicus


Alignment Length:644 Identity:190/644 - (29%)
Similarity:278/644 - (43%) Gaps:143/644 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PNARTQFPG----VLAGWREDLQGKQRRDSLTLERDVFVTTNYGQVQGFKVYMYDNPDPKSFYRP 163
            |.||  .||    |..|....||....:||.:..|:    |:.|||:|..|::   .|.||   .
  Rat     2 PLAR--LPGWLYVVACGLLLLLQHVHGQDSASPIRN----THTGQVRGSFVHV---KDTKS---G 54

  Fly   164 YHSTVDRVMGECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQAVDFGPA-CPQP-------VRY 220
            .|:           |||||:|.||....||.||.....|..::.....|| |.|.       ::.
  Rat    55 IHT-----------FLGIPFAKPPVGPLRFAPPEDPEPWSGVRDATSQPAMCLQTDIMNLDGIKE 108

  Fly   221 TGATKGIMDMDEDCLYLNVYSPKTGAGVAQKYPVMVYIHGGEFIRGASNLFQGHILASFYDVVVV 285
            ...|.....|.|||||||:|:| ..|......||||:||||..:.|::::.....||:..::|:|
  Rat   109 MKLTVHPTPMSEDCLYLNIYTP-AHAREGSNLPVMVWIHGGGLVLGSASMNDASTLAATEEIVIV 172

  Fly   286 TLNYRLGALGFLSTGDENSPGNYGILDQAMALRWVYDNIEFFNGDRNSITLFGPGAGGASAGLLM 350
            ::.||||.|||.||||:|:.||:|.|||..|||||..||.:|.|:...:|:||..|||.|....:
  Rat   173 SIQYRLGVLGFFSTGDQNARGNWGYLDQVAALRWVQQNIAYFGGNHGKVTIFGGSAGGTSVSSHV 237

  Fly   351 VAPQTRNIVRRVIAQSGSALADWALIQDKYRAQNTSRVLGQLLGCSIESSWKLVNCLRTGRSFYE 415
            |:|.::.:....|.|||.||.. .||.||  ::...:.:..|.||....|..|:.||| .:|..|
  Rat   238 VSPMSKGLFHGAIMQSGVALLP-DLISDK--SEVVYKTVANLSGCEAPDSEALIRCLR-AKSKQE 298

  Fly   416 L--GNAEFSPQVGSFPWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMT 478
            :  .|..|.                .:||        ..|.:||.:.|:.|:.:|.|: .:..:.
  Rat   299 ILAINQVFK----------------MIPG--------VVDGKFLPKHPQELLASGDFH-PVPSII 338

  Fly   479 GVTTQEAAFFVAQNESLSPYYELDGRFFDQKIREHVFR---------------YNYTLNPNGVYE 528
            |:.|.|..:      .:..:..||          |:.:               ....|.|    |
  Rat   339 GINTDECGW------GIPVFLGLD----------HIIKKITRETLPTVLKSTAAQMMLPP----E 383

  Fly   529 AIKYIY-TFWPDPNNNTIIRDQYINMLSDLYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALNLP 592
            .|..|. .:..|..|...:::|:.:||.|..:..|..|:......| .|||.|      |..:||
  Rat   384 CIDLIMEEYMGDTENPETLQEQFRHMLGDFMFVIPALQVAHFQRSQ-APVYFY------EFQHLP 441

  Fly   593 QWRKY--PHDIER-----------YFLTGAPFMDTEFFPKKEHLQRNMWTDNDRNMSHFFMQTYT 644
            .:.|.  |..::.           .:|.|..|..||   ::|.|:|.:            |:.:.
  Rat   442 SFIKQVRPSHVKADHGDDILFVFGSYLWGMTFDLTE---EEELLKRRV------------MKYWA 491

  Fly   645 NFARYGNPTPQQVLGMHFQRAYQGEIRYLNINTTYNSSILLNYRQTECAFWTQYLPTVI 703
            ||||.|||..:.:  .|:......| :||.:||.......|..|:.:  |||:.||..|
  Rat   492 NFARTGNPNGEDL--PHWPVLDHDE-QYLQLNTQPAVGRALKARRLQ--FWTKTLPQKI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GliNP_476602.1 COesterase 137..695 CDD:395084 172/596 (29%)
PRK13335 818..>918 CDD:139494
Ces2aNP_653344.1 COesterase 30..537 CDD:395084 173/604 (29%)
Blue background indicates that the domain is not in the aligned region.

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