DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and ccnb3

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001070187.1 Gene:ccnb3 / 767751 ZFINID:ZDB-GENE-060929-684 Length:398 Species:Danio rerio


Alignment Length:108 Identity:48/108 - (44%)
Similarity:71/108 - (65%) Gaps:2/108 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 MLEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLF 417
            |::| |.|...|||||:|||:||.|.::|:.||.||||...|.||.|: :.::..|||||.|.:.
Zfish   163 MVDQ-PNLNTNMRAILVDWLVEVQENFELNHETLYLAVKVTDHYLAVS-QTKREALQLIGSTAML 225

  Fly   418 VAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWD 460
            :|:|.||..||.:.:|.|:.|.|.....:::.|..:||||::|
Zfish   226 IASKFEERAPPCVDDFLYICDDAYKRSQLISMEISILQALNFD 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 47/105 (45%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224
ccnb3NP_001070187.1 CYCLIN_CCNB3_rpt1 127..268 CDD:410212 47/106 (44%)
CYCLIN_CCNB3_rpt2 272..386 CDD:410214
Blue background indicates that the domain is not in the aligned region.

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