DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and Ccnd2

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_071603.2 Gene:Ccnd2 / 64033 RGDID:621083 Length:288 Species:Rattus norvegicus


Alignment Length:254 Identity:64/254 - (25%)
Similarity:110/254 - (43%) Gaps:54/254 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 QDSRLRSISMLEQ------------HPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRY 396
            :|..|:::..:|:            ...:||.||.::..|::||||..|...|.|.||::||||:
  Rat    22 EDRVLQNLLTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRF 86

  Fly   397 LHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDI 461
            | ......||||||:|..|:|:|:|::|..|....:....||.:...:::|..|.::|..|.|::
  Rat    87 L-AGVPTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVLGKLKWNL 150

  Fly   462 SPITITGWLGVYMQLNVNNRTPASF-SQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDV 525
            :.:                 ||..| ..|.|:...:.:...:..:.:     ||  .:.||..|.
  Rat   151 AAV-----------------TPHDFIEHILRKLPQQKEKLSLIRKHA-----QT--FIALCATDF 191

  Fly   526 GMANYSYSVLAAAAISHTF-----SREM-ALRCSGL----------DWQVIQPCARWME 568
            ..|.|..|::|..::....     ..|: ||.|..|          |...::.|...:|
  Rat   192 KFAMYPPSMIATGSVGAAICGLQQDEEVNALTCDALTELLAKITHTDVDCLKACQEQIE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 41/126 (33%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 22/123 (18%)
Ccnd2NP_071603.2 CYCLIN_SF 1..149 CDD:477360 41/127 (32%)
CYCLIN_CCND2_rpt2 154..258 CDD:410280 22/104 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..288
Blue background indicates that the domain is not in the aligned region.

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