DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and ccni

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:XP_012814707.1 Gene:ccni / 448195 XenbaseID:XB-GENE-945654 Length:383 Species:Xenopus tropicalis


Alignment Length:208 Identity:57/208 - (27%)
Similarity:100/208 - (48%) Gaps:31/208 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 GLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAK-V 422
            |:.|..|..::.||.|:...::::.||..||:..|||:| .|.|.:..:|:.|.|:|.|:||| :
 Frog    42 GISPEQRDEVILWLAELKYQFRVYPETHALAISILDRFL-AAVKARPKYLRCIAISCFFLAAKTI 105

  Fly   423 EEIYPPKIGEFAYVTDGA---CTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPA 484
            ||  ..:|.....:|.|:   |:..::|..|:|:|..|:||:...|...:|.::..:.: |.:|.
 Frog   106 EE--DERIPVLRVLTQGSSCGCSPAEVLRMERIILDKLNWDLHTATPLDFLHIFHAMTL-NASPE 167

  Fly   485 SFSQIGRQKSAEADDAFIYPQFSGFEFVQ--TSQLLDLCTLDVGMANYSYSVLAAAAISHTFSRE 547
            .|.:|              |:.:..:.|.  |.|||. |.....:..:..|:||.|.:|....:.
 Frog   168 LFDRI--------------PELNPSQHVALLTRQLLQ-CMAFHQLLQFKGSMLALALLSLEMEKL 217

  Fly   548 MALRCSGLDWQVI 560
            :.      ||..:
 Frog   218 LP------DWLAV 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 35/103 (34%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 20/100 (20%)
ccniXP_012814707.1 CYCLIN_CCNI-like 47..145 CDD:410230 34/100 (34%)

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