DRSC/TRiP Functional Genomics Resources

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Protein Alignment CycE and ccnb1.2

DIOPT Version :10

Sequence 1:NP_001246037.1 Gene:CycE / 34924 FlyBaseID:FBgn0010382 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_989121.1 Gene:ccnb1.2 / 394726 XenbaseID:XB-GENE-5736422 Length:397 Species:Xenopus tropicalis


Alignment Length:301 Identity:91/301 - (30%)
Similarity:141/301 - (46%) Gaps:78/301 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 VEEED---DDVEIYSSTISP-ASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDLMINMR------ 307
            |.||:   ...::..|:.|| .:|||             ||   :::....||::|.::      
 Frog    78 VREENVCPKPAQVEPSSPSPMETSGC-------------LP---DELCQAFSDVLIQVKDVDADD 126

  Fly   308 --TPM--SPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAIL 368
              .||  |..|::  ..|.|.:|  .||..|.:...|..|                :...|||||
 Frog   127 DGNPMLCSEYVKD--IYCYLRSL--ENAQAVRQNYLHGQE----------------VTGNMRAIL 171

  Fly   369 LDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEF 433
            :|||::|...::|.:||.::.|..:||:|. .|.|.|..|||:|:|.:|:|||.||:|||:||:|
 Frog   172 IDWLVQVQMKFRLLQETMFMTVGIIDRFLQ-DHPVPKNQLQLVGVTAMFLAAKYEEMYPPEIGDF 235

  Fly   434 AYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEAD 498
            .:|||...|:..|.:.|..:|:.|.:.|         |..:.|:...|.    |:|| :.:||..
 Frog   236 TFVTDHTYTKAQIRDMEMKVLRVLKFAI---------GRPLPLHFLRRA----SKIG-EVTAEQH 286

  Fly   499 DAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAA 539
            ....|             |::|..:|..|.:||.|.:||||
 Frog   287 SLAKY-------------LMELVMVDYDMVHYSPSQIAAAA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CycENP_001246037.1 CYCLIN_CCNE_rpt1 327..459 CDD:410223 49/131 (37%)
CYCLIN_CCNE_rpt2 463..576 CDD:410224 20/77 (26%)
ccnb1.2NP_989121.1 CYCLIN_CCNB1_rpt1 133..261 CDD:410268 54/148 (36%)
CYCLIN_CCNB1_rpt2 266..386 CDD:410272 19/67 (28%)

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