DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and hpn

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001091657.2 Gene:hpn / 569259 ZFINID:ZDB-GENE-141212-373 Length:425 Species:Danio rerio


Alignment Length:269 Identity:68/269 - (25%)
Similarity:114/269 - (42%) Gaps:57/269 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AKPAEFPWTIAVIHNRSLVGGGSLITPDIVLTAAH-----------------RIFNKDVEDIVVS 97
            |:...:||.:::.::.....|||:|:...:::|||                 .|:|..:...||.
Zfish   170 ARQGSWPWQVSLQYDGVHQCGGSIISDRWIISAAHCFPERYRHASRWRVLMGSIYNTPIRKNVVI 234

  Fly    98 AGEWEYGSALEKYPFEEAFVLKMVIHKSF------NYQRGANNLALLFLDREFPLTYKINTICLP 156
            |.                 |..:|.|.|:      |....:.::|::.|.:....|..|..:|||
Zfish   235 AE-----------------VKTVVYHSSYLPFVDANIDDNSRDIAVISLTKPLQFTDYIQPVCLP 282

  Fly   157 TQKRSLSSTRC-IVAGWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRKTRLGQNY---TLPRG 217
            |..:.|:..:. .|.|||..::..|. ..||::..:||:...:|.        |.:|   .:...
Zfish   283 TYGQRLADGQMGTVTGWGNVEYYGTQ-ANVLQEAHVPIISDAVCN--------GPDYYDNQVTTT 338

  Fly   218 LICAGGEK-DNDACTGDGGGA-LFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWI 280
            :.|||.|| ..|:|.||.||. :...:.....::..:|:|:||.||.....|..||.|..|.|||
Zfish   339 MFCAGYEKGGTDSCQGDSGGPFVAADVLSKTSRYRLLGVVSWGTGCAMAKKPGVYTRVSRFLPWI 403

  Fly   281 --VQQIKEN 287
              ..::.||
Zfish   404 STAMRMYEN 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 64/258 (25%)
hpnNP_001091657.2 Hepsin-SRCR 53..160 CDD:462736
Tryp_SPc 164..404 CDD:238113 65/259 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.