DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and CG11313

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_651821.3 Gene:CG11313 / 43646 FlyBaseID:FBgn0039798 Length:370 Species:Drosophila melanogaster


Alignment Length:280 Identity:80/280 - (28%)
Similarity:125/280 - (44%) Gaps:56/280 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VQFN-VTEG-QAKPAEFPWTIAVIHNRSLVG-------GGSLITPDIVLTAAH------RIFNKD 90
            :.:| :|:| :....||.|.: ::..|...|       .||||....|:||||      |....|
  Fly   111 IAYNQITKGNETVLTEFAWMV-LLEYRPHDGQQLRTYCAGSLINNRYVVTAAHCVSAATRARKGD 174

  Fly    91 VE-DIVVSAGEWEYGSALE-------KYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLT 147
            |. .:.|..||....:.::       ..|.:.| |.::.||:||..:...|::||:.|.||...:
  Fly   175 VSFRVSVRLGEHNTSAVVDCLNGRCLPEPVQIA-VEEIRIHESFGTRLFWNDIALIRLAREVAYS 238

  Fly   148 YKINTICLPTQ---KRSLSSTRCIVAGWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRK---- 205
            ..|..:|||:.   :...|.....|||||:...|::  ..|..|:.:..|...:|:   ||    
  Fly   239 PSIRPVCLPSTVGLQNWQSGQAFTVAGWGRTLTSES--SPVKMKLRVTYVEPGLCR---RKYASI 298

  Fly   206 TRLGQNYTLPRGLICAGGEKDNDACTGDGGGALFCPMTEDPKQFEQ-----IGIVNWGVGCKEKN 265
            ..||.::      :||.|....|:|.||.||.|..        |.:     .|||::|:.|..:.
  Fly   299 VVLGDSH------LCAEGRSRGDSCDGDSGGPLMA--------FHEGVWVLGGIVSFGLNCGSRF 349

  Fly   266 VPATYTDVFEFKPWIVQQIK 285
            .||.||:|..::.||.|.|:
  Fly   350 WPAVYTNVLSYETWITQNIR 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 73/262 (28%)
CG11313NP_651821.3 CLIP 24..78 CDD:463440
Tryp_SPc 116..367 CDD:238113 77/271 (28%)
Blue background indicates that the domain is not in the aligned region.

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