DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:266 Identity:92/266 - (34%)
Similarity:131/266 - (49%) Gaps:20/266 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 LKCGYGNPDAVKVQFNVTEG-QAKPAEFPWTIAVIHNRSLVGGGSLITPDIVLTAAH---RIFNK 89
            |:||..|| ....|..:..| .|.|.||||...:..:.....||||||...:|||||   |:.:.
  Fly   385 LQCGNKNP-VTPDQERIVGGINASPHEFPWIAVLFKSGKQFCGGSLITNSHILTAAHCVARMTSW 448

  Fly    90 DVEDIVVSAGEWEYGSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKINTIC 154
            ||..:....|::..|:..|....... :.::|.||.|.:....|::|:|.|....|.|.:|..||
  Fly   449 DVAALTAHLGDYNIGTDFEVQHVSRR-IKRLVRHKGFEFSTLHNDVAILTLSEPVPFTREIQPIC 512

  Fly   155 LPT----QKRSLSSTRCIVAGWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRKTRLGQNYTLP 215
            |||    |.||.|.....|||||..: .:.....:|:|:|:||.....|..:..:...|   .:.
  Fly   513 LPTSPSQQSRSYSGQVATVAGWGSLR-ENGPQPSILQKVDIPIWTNAECARKYGRAAPG---GII 573

  Fly   216 RGLICAGGEKDNDACTGDGGGALFCPMT-EDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPW 279
            ..:||| |:...|:|:||.||    ||. .|..::.|:|||:||:||.:...|..||.|....||
  Fly   574 ESMICA-GQAAKDSCSGDSGG----PMVINDGGRYTQVGIVSWGIGCGKGQYPGVYTRVTSLLPW 633

  Fly   280 IVQQIK 285
            |.:.||
  Fly   634 IYKNIK 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 81/237 (34%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 84/246 (34%)
Blue background indicates that the domain is not in the aligned region.

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