DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and CG40160

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001015212.1 Gene:CG40160 / 3354965 FlyBaseID:FBgn0058160 Length:421 Species:Drosophila melanogaster


Alignment Length:271 Identity:103/271 - (38%)
Similarity:147/271 - (54%) Gaps:12/271 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGYGNPDAVKVQFN-VTEGQAKPAEFPWTIAVIH--NRSLVGGGSLITPDIVLTAAHRIFNKDVE 92
            ||..|...:....: |::.:|...|||||:|::|  |.|....||||...:||||||.:.:....
  Fly   151 CGVRNTGGLDFTLSGVSQNEAGFGEFPWTVALLHSGNLSYFCAGSLIHKQVVLTAAHCVESLRTG 215

  Fly    93 DIVVSAGEWEYGSALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKINTICLPT 157
            ...|.||||:..:..|:.|::|..|..:::|..:|.:..|.:.||:.|.:...|...||.||||.
  Fly   216 SFTVRAGEWDTQTMKERLPYQERSVQTVILHPDYNRRSIAYDFALVILSQPVTLDDHINVICLPQ 280

  Fly   158 QKR-SLSSTRCIVAGWGKYQFSDT-HYGGVLKKIDLPIVPRHICQDQLRKTRLGQNYTLPRGLIC 220
            |.. ......|...||||..|... .|..::|::.||||..:.||.:||.||||..:.|.|..||
  Fly   281 QDDIPQPGNTCFSTGWGKDAFGSLGKYSSLMKRVPLPIVEFNSCQTRLRGTRLGPKFALDRSFIC 345

  Fly   221 AGGEKDNDACTGDGGGALFCPM-TEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWIVQQI 284
            |||::..|.|.||||..|.||. :....:::|.|||.||:||.:: |||.|.:|...:.||.||:
  Fly   346 AGGQRGIDTCQGDGGAPLACPRGSTRESRYQQTGIVAWGIGCNDE-VPAAYANVALVRGWIDQQM 409

  Fly   285 KEN-----LYT 290
            ..|     :||
  Fly   410 LTNGFGTAVYT 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 92/234 (39%)
CG40160NP_001015212.1 CLIP_1 73..127 CDD:465709
Tryp_SPc 166..408 CDD:238113 95/242 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.