DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and CG30288

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001097398.1 Gene:CG30288 / 246531 FlyBaseID:FBgn0050288 Length:282 Species:Drosophila melanogaster


Alignment Length:300 Identity:79/300 - (26%)
Similarity:124/300 - (41%) Gaps:50/300 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIVALFVLGVAENVENLQQIEELKCGYGNPDAVKVQFNVTEGQAKPAEF-PWTIAVIHNRSLVGG 70
            :|||...:|:......  ::.|..||..:.:..:.:  :..|:....|. ||.:.|:.:...|.|
  Fly     9 VIVACLFIGIIRTESG--RLLENDCGTTSSNGYRAR--IDGGRDAGMESNPWMVRVMISGKAVCG 69

  Fly    71 GSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPFEEA--FVL----------KMVIH 123
            |||||...||||.|.|....:.   |..||::     .::|..:.  ||.          :.::|
  Fly    70 GSLITARFVLTAEHCISPMYMN---VRLGEYD-----TRHPIFDCDDFVCTPRAYNVDVDRKIVH 126

  Fly   124 KSFNYQRGANNLALLFLDREFPLTYKINTICLPTQK----RSLSSTRCIVAGWGKYQFSDTHYGG 184
            .:..|     ::.||.:.|....:..:..|||...|    ..||..|....|||..  ||.....
  Fly   127 SNPGY-----DIGLLRMQRSVIFSNYVRPICLILGKTLGGNPLSILRFNFTGWGTN--SDGEEQD 184

  Fly   185 VLKKIDLPIVPRHICQDQLRKTRLGQNYTLPRGLICAGGEKDNDACTGDGGGALFCPMT-EDPKQ 248
            .|:...|..:|:..|:      |.|:  .|....||| |...:|:|.||.||.|....| |...:
  Fly   185 RLQTATLQQLPQWSCE------RPGR--PLDISYICA-GSYISDSCKGDSGGPLSAIRTFEGQGR 240

  Fly   249 FEQIGIVNWGVG-CKEKNVPATYTDVFEFKPWIVQQIKEN 287
            ..|.|:.:.|:. |....:   ||:|..|..||:..|:.:
  Fly   241 VFQFGVASQGLRLCSGLGI---YTNVTHFTDWILDVIQNH 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 68/248 (27%)
CG30288NP_001097398.1 Tryp_SPc 45..270 CDD:238113 69/251 (27%)

Return to query results.
Submit another query.