DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and CG30287

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster


Alignment Length:312 Identity:79/312 - (25%)
Similarity:128/312 - (41%) Gaps:68/312 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIVALFVLGVAENVENLQQIEELKCGYGNPDAVKVQ-----FNVTEGQAKPAEF---PWTIAVIH 63
            |::||..|.|......|           :|..|..:     :.|..|  |||:.   ||.:.:|.
  Fly    10 LLIALVFLKVQGQPHLL-----------DPQCVTARSEPGLYRVING--KPADLFSNPWMVIIIE 61

  Fly    64 NRSLVGGGSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPF------EEAFVLKMVI 122
            ...:..|||||||..|||||| ..::....:.|..|:::...|::...:      .|..|.:..:
  Fly    62 RGMMKCGGSLITPRYVLTAAH-CKSETKSQLTVRLGDYDVNQAVDCSSYGCIPRPREINVTRTYV 125

  Fly   123 HKSF-NYQRGANNLALLFLDREFPLTYKINTICLPTQKRSLSST--RCIVAGWGKYQFSDTHYGG 184
            ...: |:::  |::|||.|:........|.:|||.....:.||.  :.:|      :|:.|.:|.
  Fly   126 PSHYTNFRK--NDIALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLV------KFNTTGWGR 182

  Fly   185 VLKKIDLPIVPR------HI--CQDQLRKTRLGQNYTLPRGLICAGGEKDNDACTGDGGGALFCP 241
            ...:|:.|::.:      |:  |.....|       .|.:..||. .......|.||.||    |
  Fly   183 TESRINSPVLQQASLTHHHLSYCAQVFGK-------QLDKSHICV-ASSTGSTCQGDSGG----P 235

  Fly   242 MTE-----DPKQFEQIGIVNWG-VGCKEKNVPATYTDVFEFKPWIVQQIKEN 287
            :|.     ..::....|:|::| |.|..   |..||:|..|..||....|:|
  Fly   236 LTARVRIGSERRVILFGVVSYGAVHCFG---PTVYTNVIHFANWIELHTKKN 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 65/255 (25%)
CG30287NP_726083.1 Tryp_SPc 42..280 CDD:238113 69/263 (26%)

Return to query results.
Submit another query.