DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18478 and LOC1270989

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_309727.5 Gene:LOC1270989 / 1270989 VectorBaseID:AGAMI1_005526 Length:361 Species:Anopheles gambiae


Alignment Length:275 Identity:96/275 - (34%)
Similarity:137/275 - (49%) Gaps:24/275 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QIEELKCG--YGNPDAVKVQFNVTEGQAKPAEFPWTIAVIH--------NRSLVGGGSLITPDIV 79
            |..:::||  ..:|....|:.|:|  .|...|||||:|:.:        ..:||||||||.|..|
Mosquito    88 QTADVQCGSPVTSPLVYNVESNLT--YANYGEFPWTVAIFNISFSANEMKLTLVGGGSLIHPKFV 150

  Fly    80 LTAAHRIFNKDVEDIVVSAGEWEYGSALEKYPFEEAFVLKMVIHKSFNYQRGA----NNLALLFL 140
            |||||.:  |..:..|...|||...|..|.||.::..:.:.:||.|:   |.:    |::||..|
Mosquito   151 LTAAHTL--KKPDRYVARFGEWSINSDAEIYPSQDIGIEEHIIHPSY---RDSCLLDNDIALAVL 210

  Fly   141 DREFPLTYKINTICLPTQKRSLSSTRCIVAGWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRK 205
            .|....|..|..||||:........|||..||| ..........::|:|:||:|||..||...|:
Mosquito   211 KRNVIYTEHIRPICLPSPTDVYDGQRCIATGWG-LDVRTQQPAPIMKRIELPVVPRDRCQLLYRR 274

  Fly   206 TRLGQNYTLPRGLICAGGEKDNDACTGDGGGALFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATY 270
            ..:..::.|.|.::|||||...|.|..|||..|.|  .::...:...||.:||:.|...:.|..|
Mosquito   275 AEVDYSFKLHRSMMCAGGEVGEDTCDQDGGTPLAC--KKEDGSYVVAGITSWGLDCGRVDAPGIY 337

  Fly   271 TDVFEFKPWIVQQIK 285
            .||.:|..||...|:
Mosquito   338 VDVAKFACWINDTIE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 86/241 (36%)
LOC1270989XP_309727.5 None

Return to query results.
Submit another query.