DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18478 and LOC100004427

DIOPT Version :10

Sequence 1:NP_609764.1 Gene:CG18478 / 34923 FlyBaseID:FBgn0028517 Length:294 Species:Drosophila melanogaster
Sequence 2:XP_005163955.1 Gene:LOC100004427 / 100004427 -ID:- Length:302 Species:Danio rerio


Alignment Length:244 Identity:67/244 - (27%)
Similarity:98/244 - (40%) Gaps:36/244 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 NVTEGQAKPAEFPWTIAVIHNRSLVG----GGSLITPDIVLTAAHRIFNKDVEDIVVSAGEWEYG 104
            |.|||     .:||..::  |....|    .||||:...|||||......:|.|:|:..|.....
Zfish    41 NATEG-----SWPWQASI--NFKSTGQFFCSGSLISERWVLTAASCFQRINVSDVVIYLGRLTTN 98

  Fly   105 SALEKYPFEEAFVLKMVIHKSFNYQRGANNLALLFLDREFPLTYKINTICLPTQ-KRSLSSTRCI 168
            .:   .|:|   :.:.||..|.     ..::||:.|......|..|..:||... ...:..|...
Zfish    99 GS---NPYE---IPRTVIQVSV-----TEDIALVQLSSSVTFTDYIRPVCLAAAGSVFVDGTESW 152

  Fly   169 VAGWGKYQFSDTHYGGVLKKIDLPIVPRHICQDQLRKTRLGQNYTLPRGLICAG--GEKDNDACT 231
            |.|||....::.....:||:::.|||....|.:....|.|.       .:||||  .|.....|.
Zfish   153 VTGWGSTSSTNVILSDMLKEVEAPIVNNIECSNINGITNLD-------NVICAGFVNETGKAPCW 210

  Fly   232 GDGGGALFCPMTEDPKQFEQIGIVNWGVGCKEKNVPATYTDVFEFKPWI 280
            .|.|..|   :|....|:.|.|:|.: ..|.:...|..|..|.|::.||
Zfish   211 EDFGSPL---VTRQGSQWIQSGVVVF-TFCGQNGFPTLYARVSEYEEWI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18478NP_609764.1 Tryp_SPc 50..280 CDD:214473 61/236 (26%)
LOC100004427XP_005163955.1 Tryp_SPc 36..257 CDD:238113 67/244 (27%)

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