DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and CG4424

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:284 Identity:79/284 - (27%)
Similarity:113/284 - (39%) Gaps:63/284 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 CQQCNKCYATYA-------GLVKH--QQ----------THAYESTEYKIIRSQPGGSGAIVDQTE 315
            ||:.|:....|.       |:||.  ||          |...|..|.:::..   |..:..|..|
  Fly    82 CQRSNEFLREYVIKDAVEQGVVKEVVQQTRPSTPPPIETEQLEPPEDEVLEE---GVWSTEDPIE 143

  Fly   316 FCTDQASALIQAANVASAQSMQKPVGVPRYHCQDCGKSYSTYSGLSKHQQFHCPSAEGNQVK-KV 379
            . |....|..:...|.:.:.:..|...|.          ||           .|.|....|| |:
  Fly   144 E-TPHGPAEKERPTVLTVEMLPAPYPPPA----------ST-----------PPPAPAGAVKGKL 186

  Fly   380 FSCKNCDKTYVSLGALKMHIRTHT--LPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRA 442
            ..|..|...|.....|..|:|.|.  .|.:|.||.|:|...:.|:.|||.|||.||::||:|.|.
  Fly   187 HVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRN 251

  Fly   443 FADRSNLRAHMQTHSDVKKYSCPTCTKSFSRMSLLAKHLQSG-------CQTEQSGGPSGSGGGF 500
            ||||::|..|.:||.:.:.|:|.||.|.|:..|:|..|.::.       ||.        ....|
  Fly   252 FADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQL--------CNKSF 308

  Fly   501 DQ-QQLQQHLQVYEEGHNPHQLYY 523
            .: ..|..|||..:..::|....|
  Fly   309 ARIHNLVAHLQTQQHINDPRLTAY 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 9/38 (24%)
C2H2 Zn finger 317..334 CDD:275368 3/16 (19%)
zf-C2H2 345..367 CDD:395048 2/21 (10%)
C2H2 Zn finger 347..367 CDD:275368 2/19 (11%)
zf-C2H2 380..402 CDD:395048 6/21 (29%)
C2H2 Zn finger 382..402 CDD:275368 6/19 (32%)
zf-C2H2 406..428 CDD:395048 9/21 (43%)
C2H2 Zn finger 408..428 CDD:275368 9/19 (47%)
zf-C2H2 434..456 CDD:395048 10/21 (48%)
C2H2 Zn finger 436..456 CDD:275368 10/19 (53%)
C2H2 Zn finger 464..481 CDD:275368 7/16 (44%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 3/9 (33%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
COG5048 210..>345 CDD:227381 45/131 (34%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 10/19 (53%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..320 CDD:275368 6/26 (23%)

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