DRSC/TRiP Functional Genomics Resources

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Protein Alignment wor and CG31612

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_724363.1 Gene:CG31612 / 35427 FlyBaseID:FBgn0051612 Length:987 Species:Drosophila melanogaster


Alignment Length:633 Identity:120/633 - (18%)
Similarity:201/633 - (31%) Gaps:221/633 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 KSEPEPQPVPTELRR----RFDAAMNQTKEQLA----------RRIWEETREIARAFPDVFTREE 102
            |:||:|   |...||    |.|...:.....|.          ||:.:::|...:|     ..:|
  Fly   340 KNEPKP---PKRQRRANLLRCDLCRHTMARHLIGKHLISHYHFRRLQQQSRIRRQA-----CLQE 396

  Fly   103 IAKSLARLGYGEFELPPEEEVMEPEPEPEQHLPLRYTRDASPTIIKAEPSDEE------------ 155
            |.|.:..:               ....|.|.:|.|:..:...|.:....|.|.            
  Fly   397 ILKHMGSI---------------VRQSPFQCMPCRFYANTEETFLYHWKSHEHLELTKRLGGTFW 446

  Fly   156 ----QFPLRNYNNNLLKSIAEYEDCMKMQNIKEEIPPIPSPQLFYPPPTPLAEPEDLSVTQRRVL 216
                ||. .|.||::|..:.:......:..:...:|                    :.:.|||.:
  Fly   447 CSFCQFN-SNTNNSMLLHLLDSSHKEVLLALNRSVP--------------------ICIAQRRRI 490

  Fly   217 S---------ENMNLQNVARALLSMQHMAPQHAPPPIDMEEDQENQDINQLKIKSSNDLYYQCQQ 272
            .         .|:.|:         ||...:|  |.:.:             ..::.|.|....:
  Fly   491 QCSRCGMEFLYNIQLR---------QHSITEH--PGLAL-------------TGTAADEYQSRFR 531

  Fly   273 CNKCYAT-------------------------------------YAGLVKHQQ------------ 288
            ||.|.::                                     :..||.|:|            
  Fly   532 CNLCGSSQKSRLALQRHKKHKHHLARYFCAICRLEFDNSLDARRHRSLVIHKQKARPQTSIPQPE 596

  Fly   289 ---THAYESTEYKIIRSQPGGSGAIVDQTEFCTDQASALIQAANVASAQSMQKPVGVPRYHCQDC 350
               .|.......:.:.|.|....|  |....|::....:..:..:|..|:  :......:.|..|
  Fly   597 NEIEHMLREVLEETVPSPPAKRSA--DVNAKCSNSRKTIESSQRLAQHQA--EVHSSDNHLCLSC 657

  Fly   351 GKSYSTYSGLSKHQQFHCPSAEGN--------QVKKVFSCKNC--------DKTYVSLGALKMHI 399
            |.|:.:...|.:|.:...|.|..:        |.|.::||..|        |..|..:    .|.
  Fly   658 GISFESAQALGRHTRSCQPLASTSTPADLSQAQKKSMYSCDQCRFQSQYESDLVYHRI----FHT 718

  Fly   400 RTHTL----PCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQT-HSDV 459
            |:.|:    ..:||:|.|.|.: ..|:.|:|.||.||.|.|..|.:.||.|.||:.|:.| |:.|
  Fly   719 RSGTIGKNEVLQCPLCPKNFKK-HSLRAHLRNHTNEKIFECTECLQKFARRHNLKNHVITKHAKV 782

  Fly   460 -----------------KKYSCPTCTKSFSRMSLLAKHLQSGCQTEQSG----GPSGSGGGFDQQ 503
                             .||.|.||.|..::...|..|..|..:..:..    ....|..|...:
  Fly   783 GDKEKKKYAAKDVEQSKPKYQCGTCGKLLAKKYSLKLHEISHSKAVERNYLCHFADCSYAGRTPE 847

  Fly   504 QLQQHLQVY-EEGH----------NPHQLYYAGSVGSSNGEEEEGGEY 540
            .|:.||..: :|.|          ...:|:....:.|::..|:.|.|:
  Fly   848 SLKTHLVSHSQENHKCARINCSYVGKSELHLKRHLKSAHSTEKNGEEW 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/71 (10%)
C2H2 Zn finger 317..334 CDD:275368 2/16 (13%)
zf-C2H2 345..367 CDD:395048 6/21 (29%)
C2H2 Zn finger 347..367 CDD:275368 6/19 (32%)
zf-C2H2 380..402 CDD:395048 7/29 (24%)
C2H2 Zn finger 382..402 CDD:275368 6/27 (22%)
zf-C2H2 406..428 CDD:395048 8/21 (38%)
C2H2 Zn finger 408..428 CDD:275368 8/19 (42%)
zf-C2H2 434..456 CDD:395048 10/22 (45%)
C2H2 Zn finger 436..456 CDD:275368 9/20 (45%)
C2H2 Zn finger 464..481 CDD:275368 5/16 (31%)
CG31612NP_724363.1 C2H2 Zn finger 697..717 CDD:275368 4/23 (17%)
C2H2 Zn finger 731..750 CDD:275368 8/19 (42%)
C2H2 Zn finger 758..779 CDD:275368 9/20 (45%)
C2H2 Zn finger 804..824 CDD:275368 6/19 (32%)
C2H2 Zn finger 834..856 CDD:275368 5/21 (24%)
C2H2 Zn finger 898..918 CDD:275368
zf-H2C2_2 910..935 CDD:463886
C2H2 Zn finger 926..945 CDD:275368
C2H2 Zn finger 957..984 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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