DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wor and CG4496

DIOPT Version :10

Sequence 1:NP_476601.1 Gene:wor / 34906 FlyBaseID:FBgn0001983 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_609101.1 Gene:CG4496 / 34000 FlyBaseID:FBgn0031894 Length:580 Species:Drosophila melanogaster


Alignment Length:615 Identity:124/615 - (20%)
Similarity:203/615 - (33%) Gaps:193/615 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 ASAAVPMEPHWMAKSEPEPQPVPTELRRRFDAAMNQTKEQLARRIWEETREIARAFPDVFTREEI 103
            |...:|.:|......|||...:..:     |..:.....|:.::..|:..||.|.. :...||:.
  Fly    37 ACGLIPPDPVRYEYQEPEENFISID-----DVKIKSFLWQIGQQQREKELEIKRIM-EQEKREKR 95

  Fly   104 AKSLARLGYGEFELPPEEEVMEPEPEPEQHLPLRYTRDASP--TIIKAEPSDEEQFPLRNYNNNL 166
            .|...     |.|...::||:|.:.|..|          ||  .||.|..|      |.::|:::
  Fly    96 EKERR-----EAEKRRDQEVIELDEEEAQ----------SPRGLIISAARS------LAHWNSSI 139

  Fly   167 LKSIAEYEDC-MKMQNIKEEIPPIPSPQLFYPPPTPLAEPEDLSVTQRRVLSENMNL-QNVARAL 229
            .:...:.|.. .::..:..||                 |..|....:...:.|:::| .|....:
  Fly   140 RRVTPDIELIPRRVHRVVAEI-----------------ELSDSDHDEDSEVDEDVSLPSNAVSCV 187

  Fly   230 LSMQHMAPQHAPP------PIDMEEDQENQDINQLKIKSSNDL-------------YYQCQQCNK 275
            |:.|.......|.      |.|.|::|:..::.:.|...|..|             .|:|..|.|
  Fly   188 LNEQRQDGSQNPQELVIIVPSDQEDEQKTDNVIKRKSSGSRRLVKRRPGANRRGRHMYECPDCGK 252

  Fly   276 -------------------------C---YATYAGLVKHQQTHAYE------------------- 293
                                     |   :..::.|.||::.|:::                   
  Fly   253 KVQSNYNLRRHMMIHTGERPFPCDLCERRFREFSDLKKHRRRHSHDPQFICMICHLGAPLEQDST 317

  Fly   294 -----STEYKIIRSQPGGSGAIVDQTEFCTDQASA----LIQAA-------NVASAQSM------ 336
                 .::..:::.||...|.  ..||..:|:...    :.:||       .||:..|:      
  Fly   318 RCADCESKNLMVKPQPEELGE--KTTEEHSDEMEGDDDEIEEAALENEKQPQVATQPSLMVTLIP 380

  Fly   337 ---QKPVGVPRYHCQ--------DCGKSYSTYSGLSKHQQFHCPSAEGNQVKKVFSCKNCDKTYV 390
               ..|..||. |.|        .|..:.|: |.||.         :||...|  |.....::| 
  Fly   381 PIQSPPEKVPS-HTQPSRPPLPRSCSSANSS-SSLSN---------DGNIAGK--SMSRTRRSY- 431

  Fly   391 SLGALKMHIRTHTLPCKCPICGKAFSRPWLLQGHIRTHTGEKPFSCQHCNRAFADRSNLRAHMQT 455
                            .||:|.:.|.....|:.|...|||||||||..|.:.|.:.|.|:.||.|
  Fly   432 ----------------PCPLCHRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFRECSTLKKHMVT 480

  Fly   456 HSDVKKYSCPTCTKSF-----------SRMSLLAKHLQSGCQTEQSGGPSGSG--GGFDQQQLQQ 507
            |...:.|.|..|...|           :....|:....|..:::..|..|...  ...:.||...
  Fly   481 HVRDRWYKCLRCPSKFRDYLEYSDHKNNHQDQLSSRKSSIYESDDDGDSSVEDCLECCECQQRFT 545

  Fly   508 HLQVYEEGHNPHQL-YYAGSVGSSNGEEEE 536
            .|..|......|.| .|..|:.....||::
  Fly   546 ELDAYTAHLKKHDLELYGMSIDDVADEEQD 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
worNP_476601.1 C2H2 Zn finger 270..290 CDD:275368 7/47 (15%)
C2H2 Zn finger 317..334 CDD:275368 5/27 (19%)
zf-C2H2 345..367 CDD:395048 7/29 (24%)
C2H2 Zn finger 347..367 CDD:275368 6/27 (22%)
zf-C2H2 380..402 CDD:395048 2/21 (10%)
C2H2 Zn finger 382..402 CDD:275368 1/19 (5%)
zf-C2H2 406..428 CDD:395048 6/21 (29%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
zf-C2H2 434..456 CDD:395048 9/21 (43%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 464..481 CDD:275368 4/27 (15%)
CG4496NP_609101.1 SFP1 <208..298 CDD:227516 15/89 (17%)
zf-C2H2 245..267 CDD:395048 4/21 (19%)
C2H2 Zn finger 247..267 CDD:275368 3/19 (16%)
zf-H2C2_2 259..282 CDD:463886 1/22 (5%)
C2H2 Zn finger 275..295 CDD:275368 4/19 (21%)
zf-C2H2 431..453 CDD:395048 7/38 (18%)
C2H2 Zn finger 433..453 CDD:275368 6/19 (32%)
zf-H2C2_2 445..466 CDD:463886 12/20 (60%)
C2H2 Zn finger 461..481 CDD:275368 7/19 (37%)
C2H2 Zn finger 489..510 CDD:275368 3/20 (15%)

Return to query results.
Submit another query.