DRSC/TRiP Functional Genomics Resources

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Protein Alignment: nht and TAF4B

Sequence 1:NP_523574.4 Gene:nht FlyBaseID:FBgn0041103 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001280654.1 Gene:TAF4B HGNCID:11538 Length:867 Species:Homo sapiens

Alignment Length:220 Identity:53/221 (24%)
Similarity:98/221 (44%) Gaps:46/221 (21%)


  Fly    53 SIYKKIM----KHLSQGNQADDINISEQEWLLDSFLAALETYMKHVVKKTIELCEHR-TSYHLHN 112
            ::.|:|:    ||......:|.:|:..|         |.:..::.:::|...:.:|| |:|..  
Human   664 ALQKRILDIGKKHDITELNSDAVNLISQ---------ATQERLRGLLEKLTAIAQHRMTTYKA-- 717

  Fly   113 DERCVMKNDMRVTMMFL----------NDLEIADY--------GSSDDETGFYRKRRAENIDEER 159
            .|..::.:|.|..:.||          .|||..:.        .:.:|......|::|:.: ::.
Human   718 SENYILCSDTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKEL-QQL 781

  Fly   160 KVARLE--SVNDTALLAISGR-KRPGEQ----LAPESAPSGSKVAKLTGAPIQRACAPRFKHMNI 217
            ::|:::  ..|.|||.||..| |||.|.    |......||:  :.||..  ::...||...:.:
Human   782 ELAQIQHRDANLTALAAIGPRKKRPLESGIEGLKDNLLASGT--SSLTAT--KQLHRPRITRICL 842

  Fly   218 RDVLQFMEEDRRYARSNMLFEAYLK 242
            ||::..||::|....|..|:.|.||
Human   843 RDLIFCMEQEREMKYSRALYLALLK 867

Known Domains:


GeneSequenceDomainRegion External IDIdentity
nhtNP_523574.4 TAF4 10..238 CDD:173965 50/215 (23%)
TAF4BNP_001280654.1 TAFH 258..346 CDD:284862
TAF4 621..862 CDD:283017 50/214 (23%)
Required for interaction with TAF12. {ECO:0000269|PubMed:15601843} 835..867 11/32 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG2341
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0001222
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR15138
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.000

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