DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment nht and Taf4b

DIOPT Version :9

Sequence 1:	NP_523574.4	Gene:	nht / 34902	FlyBaseID:	FBgn0041103	Length:	245	Species:	Drosophila melanogaster
Sequence 2:	XP_006254501.1	Gene:	Taf4b / 291773	RGDID:	1562997	Length:	852	Species:	Rattus norvegicus

Alignment Length:	218	Identity:	51/218 - (23%)
Similarity:	96/218 - (44%)	Gaps:	42/218 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly    53 SIYKKIM----KHLSQGNQADDINISEQEWLLDSFLAALETYMKHVVKKTIELCEHRTSYHLHND 113
            ::.|:|:    ||......:|.:|:...         |.:..::.:::|...:.:||.:.: ...
  Rat   649 ALQKRILDIGKKHDITELNSDAVNLISH---------ATQERLRGLLEKLTAIAQHRMTIY-KGS 703

  Fly   114 ERCVMKNDMRVTMMFL----------NDLEIADY--------GSSDDETGFYRKRRAENIDEERK 160
            |..::..|.|..:.||          .|||..:.        .:.:|......|::|:.: ::.:
  Rat   704 ENYILSTDTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKEL-QQLE 767

  Fly   161 VARLE--SVNDTALLAISGRKRPGEQLAPES---APSGSKVAKLTGA-PIQRACAPRFKHMNIRD 219
            :|:::  ..|.|||.||..||:...:...||   .||.|....||.. |:.|   ||...:::||
  Rat   768 LAQIQYRDANLTALAAIGPRKKRPLESGNESFKDNPSASGTCSLTATRPLLR---PRITRVSLRD 829

  Fly   220 VLQFMEEDRRYARSNMLFEAYLK 242
            ::..||::|....|..|:.|.||
  Rat   830 LIFCMEQERGMKYSRALYLALLK 852

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
nht	NP_523574.4	TAF4	10..238	CDD:173965	48/212 (23%)
Taf4b	XP_006254501.1	TAFH	257..345	CDD:284862
Taf4b	XP_006254501.1	TAF4	606..847	CDD:283017	47/211 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2341
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001841
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR15138
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.910