DRSC/TRiP Functional Genomics Resources

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Protein Alignment: nht and Taf4

Sequence 1:NP_523574.4 Gene:nht FlyBaseID:FBgn0041103 Length:245 Species:Drosophila melanogaster
Sequence 2:NP_001074561.1 Gene:Taf4 MGIID:2152346 Length:1042 Species:Mus musculus

Alignment Length:324 Identity:71/325 (22%)
Similarity:117/325 (36%) Gaps:98/325 (30%)


  Fly     4 ISLEVPIQPYAGQLL---IINDLILPDS------GSQDASKAKVSIKKNQRASFFDRSSIYKKIM 59
            |.|..|.|....||.   ::...:||.:      .:|.|:..|..:|:....||.|...|     
Mouse   732 IMLTTPQQIQLNQLQPVPVVKPTVLPGTKALSTVSAQAAAAQKNKLKEPGGGSFRDDDDI----- 791

  Fly    60 KHLSQGNQADDINISEQEWLL-----------------DSFL-------AALETYMKHVVKK--- 97
               :.......:|:||:...:                 |:||       ..||...||.:.:   
Mouse   792 ---NDVASMAGVNLSEESARILATNSELVGTLTRSCKDDTFLLPAPLQRRILEIGKKHGITELHP 853

  Fly    98 -TIELCEHRTSYHLHN------------------DERCVMKNDMRVTMMFLNDLEIADYGSSDDE 143
             .:....|.|...|.|                  |:|....:|:|..:.|...|:..:....|::
Mouse   854 DVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQ 918

  Fly   144 TG--FYRKRRAENIDEERKVARLE-----------------SVNDTALLAISGRKR-------PG 182
            ..  ..|..::.:..|:.:..||:                 ..|.|||.||..||:       ||
Mouse   919 EREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCTGPG 983

  Fly   183 ---EQLAPESA-PSGSKVAKLTGAPIQRACAPRFKHMNIRDVLQFMEEDRRYARSNMLFEAYLK 242
               |...|.:| |.||.|    |.| ::....|...:|:||::..:|.:|..:.|.:|::|:||
Mouse   984 SGAEGSGPGAAVPGGSGV----GTP-RQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK 1042

Known Domains:


GeneSequenceDomainRegion External IDIdentity
nhtNP_523574.4 TAF4 10..238 CDD:173965 65/313 (21%)
Taf4NP_001074561.1 TAFH 550..633 CDD:284862
TAF4 791..1039 CDD:283017 53/261 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG2341
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0001222
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR15138
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.000

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