DRSC/TRiP Functional Genomics Resources

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Protein Alignment nht and taf4a

DIOPT Version :10

Sequence 1:NP_523574.4 Gene:nht / 34902 FlyBaseID:FBgn0041103 Length:245 Species:Drosophila melanogaster
Sequence 2:XP_005172945.3 Gene:taf4a / 100149942 ZFINID:ZDB-GENE-131127-579 Length:821 Species:Danio rerio


Alignment Length:245 Identity:46/245 - (18%)
Similarity:83/245 - (33%) Gaps:75/245 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 INISEQEWLL-----------------DSFLAALETYMKHVV-------------KKTIELCEHR 105
            :|:||:...:                 ::||:|  :.::|.:             .:.:.:..|.
Zfish   579 VNLSEESARILATNSELVGAVTRSCKDEAFLSA--SMLQHKILEIGQRFGVTDLGPEVVNIVSHA 641

  Fly   106 TSYHLHN------------------DERCVMKNDMRVTMMFLNDLE------------------I 134
            |...|.|                  |.|.....|:|..:.|...|:                  .
Zfish   642 TQQRLQNLLEKVSLIAQQKNMTYKEDSRYEQVEDVRAQLKFFEQLDQLEKQKKEEQEREILMKAA 706

  Fly   135 ADYGSSDDETGFYRKRRAENI-DEERKVARLESVNDTALLAISGRKR---PGEQLAPESAPSG-- 193
            ......:|......|::|:.: .:|....|....|.|||.||..||:   ....|..::..||  
Zfish   707 KSRSRQEDPEQLRLKQKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKPDSPSLGIDTEGSGLC 771

  Fly   194 -SKVAKLTGAPIQRACAPRFKHMNIRDVLQFMEEDRRYARSNMLFEAYLK 242
             |....|.....::....|...:|:||:|..:|.::..:.|.:|:.|.||
Zfish   772 ASASGGLNAGASRQFTRQRITRVNLRDLLFCLENEKSTSHSQLLYRALLK 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nhtNP_523574.4 TAF4 <85..237 CDD:461598 37/207 (18%)
taf4aXP_005172945.3 None

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