DRSC/TRiP Functional Genomics Resources

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Protein Alignment dao and SmydA-7

DIOPT Version :10

Sequence 1:NP_609742.1 Gene:dao / 34891 FlyBaseID:FBgn0028862 Length:882 Species:Drosophila melanogaster
Sequence 2:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster


Alignment Length:600 Identity:111/600 - (18%)
Similarity:182/600 - (30%) Gaps:207/600 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   331 AVAKNALIFESEAVAMVPSGNCRVCDYCGITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVEC 395
            |:.....|.|...:.:.|...|.           ...|..|.....|.| |:|:....   .::|
  Fly    25 AIEPGDTILEERPLLVAPHWECH-----------QLKCAQCLQESYVIC-RRCQVFPL---CMDC 74

  Fly   396 FGH---QIELFES-FGEV---------FGMPRLLQLAFRMLITGLPELLGHCR---KKPTLSKLW 444
            ..|   :.|.|.| .|:.         ||:..||:|   :|:...|...|.|:   ..|.....:
  Fly    75 NQHDEFECEFFTSGAGKALCKDILVKNFGICGLLKL---LLLLENPRTKGDCQMLIDVPINLSDY 136

  Fly   445 SAINGGLQERQDIAYSAVLRLERLKEERPTDTVIALALAAHILSIYLSKCTTFFDQLEKSLPTAS 509
            ....|..||.:::....::. ..|.:..||..:.:.||.||.:                      
  Fly   137 RDGEGMWQEHEELVVRPLME-SGLADVLPTQELTSDALHAHCI---------------------- 178

  Fly   510 RMSSAEWELLCAALLMRHIGQLRHRSLTACRSFVLPADPHVFSPLNEFQLWAAPMRLQEGHLHLL 574
            |:.|..:|                  :||.....|..   :|       :|.|            
  Fly   179 RIDSNSFE------------------VTAKDGDTLKG---IF-------VWGA------------ 203

  Fly   575 AGEVAVVSYSVYPDTLNLCRHSCSSTICAKFSGRTVTALALLDLPAGSGIYNCFAGGNFQQLPRE 639
                            .|..|...:|:.|......:...|.:.|..|..|||.:..   ..:...
  Fly   204 ----------------TLPHHCVPNTVVALDEQFNMKLYAAVPLQPGDIIYNSYTN---PLMGTS 249

  Fly   640 ERTKQL-LESGIRCHCNAC-----QLTHSD---------------DQFHKFHRYRCDNPNCMEIF 683
            :|..|| |...:.|.|:.|     ..||..               |...|...:||  |:|..:.
  Fly   250 QRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKECPGFSVCEIDSNGKLGDWRC--PDCRALL 312

  Fly   684 TPNALPHAPSLRWWLSEEYTQPEFNGADLIMCPHCGEYQKLEWFWAFTTS-----------LIDC 737
            |             .:|.:......|:.|:  ...|:.|..|   |..|.           |:|.
  Fly   313 T-------------AAEVHELQAAVGSALV--DAMGDLQVYE---ALLTQYGPLLHPNHFMLLDI 359

  Fly   738 ELIEERCKLYAAIERAENQLMDLHE-CKVALARLLLEQCLMVHREGATVLDDWEFNKLGSILRSV 801
            :      :..|:|.||...:..:.: ||..||| .:|.|                :.|..:.|:|
  Fly   360 K------QNIASILRAAALMNSMDQPCKKLLAR-RVELC----------------SDLLPVCRAV 401

  Fly   802 LPSVMAQYGGQSIEYVKYFSYFWDVMAL-----SNYKCNDRELMQMLNALEFIADEFKDIF---- 857
            :|.:...|.      :..|.|...::.|     :....:.:|.:..|.....:|.|..|:.    
  Fly   402 VPGISKLYA------IGLFEYLLALVELVELQFAESDLSKKEYVAHLRTASLVATEAMDLLRFEP 460

  Fly   858 INYYEDYIAPKFAEE 872
            .|..|.|:|.:.:.|
  Fly   461 ENSAEGYLADRISME 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
daoNP_609742.1 TPR repeat 200..235 CDD:276809
TPR repeat 243..270 CDD:276809
SET <459..657 CDD:394802 32/198 (16%)
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 25/170 (15%)
Blue background indicates that the domain is not in the aligned region.

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