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Protein Alignment dao and Smyd2

DIOPT Version :9

Sequence 1:	NP_001260462.1	Gene:	dao / 34891	FlyBaseID:	FBgn0028862	Length:	882	Species:	Drosophila melanogaster
Sequence 2:	NP_996733.1	Gene:	Smyd2 / 289372	RGDID:	727785	Length:	433	Species:	Rattus norvegicus

Alignment Length:	544	Identity:	97/544 - (17%)
Similarity:	179/544 - (32%)	Gaps:	195/544 - (35%)

- Green bases have known domain annotations that are detailed below.

  Fly   337 LIFESEAVAMVPSGNCR--VCDYC-----GITQFIPFPCIYCSNRLVVYCSRQCRFKHAAIHAVE 394
            |:|...|.|.|.:...|  .|:.|     |:::     |..|  :...||..:|:.:...:|.:|
  Rat    32 LLFSCPAYACVLTVGERGHHCECCFARKEGLSK-----CGRC--KQAFYCDVECQKEDWPLHKLE 89

  Fly   395 CFGHQIELFESFGEVFGMPRLLQLAFRMLITGLPELLGHCRKKPTLSKLWSAINGGLQERQDIAY 459
            |....:     |||.:.....::|..|
  Rat    90 CSSMVV-----FGENWNPSETVRLTAR-------------------------------------- 111

  Fly   460 SAVLRLERLKEER-PTDTVIALALAAHILSIYLSKCTTFFDQLEKSLPTASRMSSAEWELLCAAL 523
              :|..:::..|| |::.:    ||......:|.|    .|..:|.|..:.          .|||
  Rat   112 --ILAKQKMHPERTPSEKL----LAVREFESHLDK----LDNEKKDLIQSD----------IAAL 156

  Fly   524 ---LMRHIGQLRHRSLTA------CRSFVLPADPHVFSPLNEFQLWAAPMRLQEGHLHLLAGEVA 579
               ..:|:....|.||..      |..|.:..:                             |::
  Rat   157 HQFYSKHLEFPDHSSLVVLFAQVNCNGFTIEDE-----------------------------ELS 192

  Fly   580 VVSYSVYPDTLNLCRHSCSSTICAKFSGRTVTALALLDLPAGSGIYNCFAGGNFQQLPREERTKQ 644
            .:..:::|| :.|..|||...:...:.|......|:.::..|..::..:....:   |.|:|..:
  Rat   193 HLGSAIFPD-VALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLY---PTEDRNDR 253

  Fly   645 LLES-GIRCHCNACQLTHSDDQFHKFHRYRCDNPNCMEIFTPNALPHAPSLRWWLSEEYTQPEFN 708
            |.:| ...|.|..|  |..|....|....:..||           |.|.::|
  Rat   254 LRDSYFFTCECREC--TTKDKDKAKVEIRKLSNP-----------PQAEAIR------------- 292

  Fly   709 GADLIMCPH--CGEYQKLEWFWAFTTSLIDCELIEERCKLYAAIERAENQLMDLHECKVALARLL 771
              |::....  ..|:::.:.:.:.:..|..|||.:|  |:.:..|  ::.:..||....|:.
  Rat   293 --DMVRYARNVIEEFRRAKHYKSPSELLEICELSQE--KMSSVFE--DSNVYMLHMMYQAMG--- 348

  Fly   772 LEQCLMVHREGATVLDDWEFNKLGSILRSVLPSVMAQYGGQSIE-YVKYFSYF-------W---- 824
              .||        .:.|||    |::          :||.:.|: |.|::..:       |
  Rat   349 --VCL--------YMQDWE----GAL----------KYGQKIIKPYSKHYPVYSLNVASMWLKLG 389

  Fly   825 -DVMALSNYKCNDRELMQMLNALE 847
             ..|.|.|....::.|.:.:..:|
  Rat   390 RLYMGLENKAAGEKALKKAIAIME 413

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.