DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and lrriq1

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_073786028.1 Gene:lrriq1 / 565257 ZFINID:ZDB-GENE-050419-235 Length:1511 Species:Danio rerio


Alignment Length:996 Identity:209/996 - (20%)
Similarity:356/996 - (35%) Gaps:259/996 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LPNETSTLIEINCNEVALYKFPEFMHSSVRYIEMSNTHLQSVDDETFQGLRLKTLKLIDNELQDI 135
            |.|.::.|:|           .|...|.:.|||.|...:.:     |:.|.||     |.|.:||
Zfish    79 LNNVSNLLVE-----------GELPDSVLTYIEASRNQISA-----FEYLILK-----DVEEKDI 122

  Fly   136 SERSFSTMTHSLMTLDISGNKMQHLPLDALQRLHSLSRLVAQRNHITTLDGNWDAQHDTLRSLHL 200
            |.:....:.||........:.....|::..:|:.|..:...| :|:.......:.. :|..:..:
Zfish   123 SSQELFHLNHSNNPATEPASDFIDDPINWKERVISELQFGLQ-SHVEPQKSEQEIT-NTSCTEDI 185

  Fly   201 SDNDITEVAPGGGSIE--VVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSGDRTTGGRPF--- 260
            :::||:..:....|:|  .:.:..|..:...|||    .|....::..|....:.....|..   
Zfish   186 TEHDISTESKLQFSLEWRELEKRLNKEEEQKLAA----HEVERELHLNSEREEEERRRKRLMEFE 246

  Fly   261 EQLQKLLWLDLSNNRIYHVAGNYLPRSLVTMDLSSNLLTVFPQQLFEQLPELR------------ 313
            |:|:|:........::||...     ..|.:|....|:    |:|.||:.|.|            
Zfish   247 EELKKIGKFHNDGGKVYHAED-----LQVELDKQQTLI----QKLEEQMKEERRAFEEAQEEERR 302

  Fly   314 -------------IVSLRDNLIRSVQWKELQVRPLR----------MHLERLDL----------G 345
                         ..:||..|:|  :|.:.::...|          ..||:|..          .
Zfish   303 RTQKLHCRAATKLQAALRGTLVR--RWSKTELSRKREEEKKREQENRELEKLKKEREEEKKRIEE 365

  Fly   346 QNCIENLE-----SDYFQQNYSDVHLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPS 405
            :.||:..|     :||.:....:.|  .|..|||...|..|...:           ..|.|...:
Zfish   366 EECIQREETERRRADYERAKEQERH--RLEREQNVEQQKREDEMR-----------ERIKREEKN 417

  Fly   406 AFEGLTETLEYLDLERNRLTTVPVALSSLHHLK-------------------YLYLTSNQISQLN 451
            ....:.:.....|::.::.........:..:|:                   .:..|.|:.:.||
Zfish   418 NITSVKDDCRRQDVDADKTNKEMQRKEAKQNLQVEDQCKIEEERDGKNKINVLIVQTENKDNMLN 482

  Fly   452 NLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQ----LSYLNMGYNSITDIPEGIFAVDSWGSNLQ 512
            ...:...|..:.:|...:...|..:..::.:|    |.|.....|...:      .:.|.|...:
Zfish   483 AQRTEDNNEIIRTLDKTSEGDINTIEKQDKSQSINALDYTRPQINHYKE------RIKSHGEETE 541

  Fly   513 TILLRNNK----------ITHLHLGSFAGLEQIQEISLSFNDI--------TIHHPLVFENVSRT 559
            |.  .|.|          |.|.|:.:..||.         ||:        :|:..|:.......
Zfish   542 TD--SNEKPEQSRKMTKIIAHSHINAHQGLS---------NDLDIGQDHAKSINSDLMMPASDLN 595

  Fly   560 LKILELSFAVFPARS--------LESLDPLDALLPLS----QLIW---------LGLDN------ 597
            :|..|:..:.:...:        ::|.:.:.|.||.|    :|.|         |.|.|      
Zfish   596 VKSTEMENSCYRNTTESETKNYKVQSQESVSACLPDSTEQKRLAWMMSCTPWSKLSLQNKRKEQS 660

  Fly   598 --------------------------NNLKQVSNESFAQMRELSYINLS-FNQLKTLPR---GLF 632
                                      |:||||:......:...|...|| .|:|:||..   ||.
Zfish   661 KKRKARKRGPSLPPLSEDAILKAGASNSLKQVTTVMLEDLPGCSLSTLSECNKLQTLTLRRCGLT 725

  Fly   633 QSDA---HSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLS 694
            ..|.   .|.:..||:..|.:..::.:   .|..||.|.|..|:|..|  |.....:.|:.|.||
Zfish   726 SLDGLNQCSQIRYIDVQENSITHVDCE---GLSSLQILLLGRNQLMNI--HGLDEAQNLQTLQLS 785

  Fly   695 YNRLVNISH-GAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSS 758
            :|.:..||. ||..:|.:|:   :.||||.|......:|     |.|.|:.|:|:: |..:.|.:
Zfish   786 HNNISLISGLGALKMLLHLS---VDHNQLLSTRGLKEIY-----TLLHLDCSYNYL-SHVEGLEN 841

  Fly   759 YMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLR 823
            ...:..||:..|.:|:.....|.. .||.|.|..|.:.||.......|..|:.|:|..|::|.| 
Zfish   842 CALLNTLDLKGNSLTELPVLQNHV-LLRDLYLDDNLIPSLDDLKSYWLPLLQNLSVVQNSITHL- 904

  Fly   824 RRSFQGLNSLQELDLSHNQLDQLQ-----VEQFSNLRKLR-----ILRINSNR---LRALPREVF 875
             .....|.||:.||:|||.|..||     :::.|:|::|.     :|:.|:.|   |..:|..:.
Zfish   905 -SPLLDLVSLKTLDVSHNCLSDLQDLCLNLQECSSLQELSLTVNPLLQENNWRSLILETVPGLIK 968

  Fly   876 MNTRLEFLDIAENQLSVWPVP 896
            :|..    .||...:..|..|
Zfish   969 LNNE----QIAAAAVGPWKCP 985

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268 63/331 (19%)
leucine-rich repeat 99..118 CDD:275380 4/18 (22%)
leucine-rich repeat 122..146 CDD:275380 7/23 (30%)
leucine-rich repeat 147..170 CDD:275380 2/22 (9%)
leucine-rich repeat 171..194 CDD:275380 2/22 (9%)
leucine-rich repeat 195..214 CDD:275380 2/18 (11%)
leucine-rich repeat 215..236 CDD:275380 5/22 (23%)
leucine-rich repeat 266..287 CDD:275380 2/20 (10%)
leucine-rich repeat 288..311 CDD:275380 7/22 (32%)
leucine-rich repeat 312..338 CDD:275380 7/60 (12%)
LRR <338..651 CDD:443914 75/428 (18%)
leucine-rich repeat 339..365 CDD:275380 8/40 (20%)
leucine-rich repeat 366..388 CDD:275380 6/21 (29%)
leucine-rich repeat 389..412 CDD:275380 2/22 (9%)
leucine-rich repeat 414..436 CDD:275380 1/21 (5%)
leucine-rich repeat 437..459 CDD:275380 5/40 (13%)
leucine-rich repeat 460..483 CDD:275380 2/22 (9%)
leucine-rich repeat 484..510 CDD:275380 5/25 (20%)
leucine-rich repeat 511..534 CDD:275380 8/32 (25%)
leucine-rich repeat 535..589 CDD:275380 11/73 (15%)
LRR 543..971 CDD:443914 111/436 (25%)
leucine-rich repeat 590..613 CDD:275380 10/63 (16%)
leucine-rich repeat 614..639 CDD:275380 10/31 (32%)
leucine-rich repeat 640..663 CDD:275380 4/22 (18%)
leucine-rich repeat 664..687 CDD:275380 8/22 (36%)
leucine-rich repeat 688..711 CDD:275380 10/23 (43%)
leucine-rich repeat 712..735 CDD:275380 7/22 (32%)
leucine-rich repeat 740..783 CDD:275380 11/42 (26%)
leucine-rich repeat 785..808 CDD:275380 8/22 (36%)
leucine-rich repeat 809..832 CDD:275380 7/22 (32%)
leucine-rich repeat 833..856 CDD:275380 11/27 (41%)
leucine-rich repeat 857..879 CDD:275380 7/29 (24%)
leucine-rich repeat 880..900 CDD:275380 4/17 (24%)
leucine-rich repeat 905..928 CDD:275380
LRR 911..>1203 CDD:443914
leucine-rich repeat 929..952 CDD:275380
leucine-rich repeat 953..977 CDD:275380
leucine-rich repeat 978..1020 CDD:275380
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
PCC 1230..>1298 CDD:188093
lrriq1XP_073786028.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.